UCSF AI Publications
Personalization of AI Using Personal Foundation Models Can Lead to More Precise Digital Therapeutics
JMIR AI,
Peter Washington
Related to: Data Science, Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence, Precision Medicine
“Artificial Intelligence and Its Impact on Radiology”
Journal of the American College of Radiology,
Brandon K K Fields, and 13 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
Comparative Analysis of LLMs in Dry Eye Syndrome Healthcare Information
Diagnostics,
Gloria Wu [first], and 3 more from outside UCSF
Cited 1 timesRelated to: Health Disparities, Eye Disease and Disorders of Vision, Health Disparities and Racial or Ethnic Minority Health Research, Women's Health, Bioengineering
Comparative Analysis of LLMs in Dry Eye Syndrome Healthcare Information
Diagnostics,
Gloria Wu [first], and 3 more from outside UCSF
Cited 1 timesRelated to: Eye Disease and Disorders of Vision, Health Disparities and Racial or Ethnic Minority Health Research, Women's Health, Bioengineering, Health Disparities
One shot at trust: building credible evidence for medical artificial intelligence
The Lancet Digital Health,
Julian C Hong, and 2 more from outside UCSF
Altmetric score: 19One shot at trust: building credible evidence for medical artificial intelligence
The Lancet Digital Health,
Julian C Hong, and 2 more from outside UCSF
Altmetric score: 20
Cited 1 timesSynthetic Scientific Image Generation with VAE, GAN, and Diffusion Model Architectures
Journal of Imaging,
Daniela Ushizima [last], and 7 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Biomedical Imaging, Machine Learning and Artificial Intelligence, Bioengineering
Synthetic Scientific Image Generation with VAE, GAN, and Diffusion Model Architectures
Journal of Imaging,
Daniela Ushizima [last], and 7 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering, Biomedical Imaging
Specialized AI and neurosurgeons in niche expertise: a proof-of-concept in neuromodulation with vagus nerve stimulation
Acta Neurochirurgica,
Sami Barrit [first], and 11 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Epilepsy, Neurodegenerative, Brain Disorders, Neurosciences, Machine Learning and Artificial Intelligence
Specialized AI and neurosurgeons in niche expertise: a proof-of-concept in neuromodulation with vagus nerve stimulation
Acta Neurochirurgica,
Sami Barrit [first], and 11 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Epilepsy, Brain Disorders, Neurosciences, Neurodegenerative
Integrated single-nuclei and spatial transcriptomic profiling of human sacrococcygeal teratomas reveals heterogeneity in cellular composition and X-chromosome inactivation
bioRxiv,
Ernesto J Rojas [first], Benjamin J Huang, Soo-Jin Cho, Marco A Cordero, Lan Vu, Tippi C MacKenzie, Diana J Laird [last], and 4 more from outside UCSF
Related to: Human Genome, Cancer Genomics, Stem Cell Research, Genetics, Cancer, Pediatric Research Initiative
Integrating Expert Knowledge into Large Language Models Improves Performance for Psychiatric Reasoning and Diagnosis
medRxiv,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Andrew Krystal, Daniel F Becker, Anne L Glowinski, Atul J Butte
Cited 1 timesRelated to: Clinical Research
Integrating Expert Knowledge into Large Language Models Improves Performance for Psychiatric Reasoning and Diagnosis
medRxiv,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Andrew Krystal, Daniel F Becker, Anne L Glowinski, Atul J Butte
Related to: Clinical Research
Current challenges and opportunities in active and passive data collection for mobile health sensing: a scoping review
JAMIA Open,
Peter Washington [last], and 5 more from outside UCSF
Cited 1 timesRelated to: Telehealth, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Bioengineering
Toward the Autonomous AI Doctor: Quantitative Benchmarking of an Autonomous Agentic AI Versus Board-Certified Clinicians in a Real World Setting
medRxiv,
Adam Z. Oskowitz [last], and 7 more from outside UCSF
Altmetric score: 7Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Health Services, Clinical Research
Auto-MedCalc: Automated Biomarkers Discovery and Risk Score Generation with AI Agents
bioRxiv,
Sirui Ding, Sanchita Bhattacharya, Atul J. Butte
Altmetric score: 3Related to: Cardiovascular, Health Disparities, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Heart Disease, Transplantation, Health Disparities and Racial or Ethnic Minority Health Research, Data Science, Bioengineering
Generative AI in hepatology: Transforming multimodal patient-generated data into actionable insights
Hepatology Communications,
Mason Lai [first], Jennifer C. Lai, Jin Ge [last], and 1 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Bioengineering, Patient Safety, Machine Learning and Artificial Intelligence, Clinical Research, Data Science
Benchmarking Large Language Models for Predictive Modeling in Biomedical Research With a Focus on Reproductive Health
bioRxiv,
Reuben Sarwal [first], Claire Dubin, Sanchita Bhattacharya, Atul Butte, Tomiko T Oskotsky, Marina Sirota [last], and 6 more from outside UCSF
Altmetric score: 2Related to: Infant Mortality, Networking and Information Technology R&D (NITRD), Contraception/Reproduction, Pediatric Research Initiative, Genetics, Data Science, Perinatal Period - Conditions Originating in Perinatal Period, Bioengineering
GAME: Genomic API for Model Evaluation
bioRxiv,
Shiron Drusinsky, Alexander Floren, Katherine S. Pollard, and 30 more from outside UCSF
Altmetric score: 13Related to: Genetics, Machine Learning and Artificial Intelligence, Bioengineering, Biotechnology, Networking and Information Technology R&D (NITRD), Human Genome
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 155 more from outside UCSF
Altmetric score: 5
Cited 1 timesRelated to: Bioengineering, Networking and Information Technology R&D (NITRD), Data Science
AI-Y: An AI Checklist for Population Ethics Across the Global Context
Current Epidemiology Reports,
Yulin Hswen [first], Margaret Hurley, Margaret A. Handley, and 7 more from outside UCSF
Altmetric score: 1Related to: Behavioral and Social Science, American Indian or Alaska Native, Minority Health, Primary Health Care, Social Determinants of Health, Clinical Research, Health Services, Health Disparities and Racial or Ethnic Minority Health Research, Prevention, Bioengineering, Dissemination and Implementation Research, Health Disparities, Machine Learning and Artificial Intelligence
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 39 more from outside UCSF
Altmetric score: 5Related to: Networking and Information Technology R&D (NITRD), Data Science
Evaluation of the accuracy and safety of machine translation of patient-specific discharge instructions: a comparative analysis
BMJ Quality & Safety,
Marianna Kong, Alicia Fernandez, Jaskaran Bains, Ana Milisavljevic, Katherine C Brooks, Akash Shanmugam, Leslie Avilez, Junhong Li, Vladyslav Honcharov, Andersen Yang, Elaine C Khoong
Altmetric score: 2
Cited 1 timesCognitive bias in clinical large language models
npj Digital Medicine,
Jenna Lester, and 4 more from outside UCSF
Altmetric score: 16
Cited 2 timesRelated to: Behavioral and Social Science, Patient Safety, Basic Behavioral and Social Science, Clinical Research
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 155 more from outside UCSF
Altmetric score: 5Related to: Networking and Information Technology R&D (NITRD), Data Science, Bioengineering
Evaluation of the accuracy and safety of machine translation of patient-specific discharge instructions: a comparative analysis
BMJ Quality & Safety,
Marianna Kong, Alicia Fernandez, Jaskaran Bains, Ana Milisavljevic, Katherine C Brooks, Akash Shanmugam, Leslie Avilez, Junhong Li, Vladyslav Honcharov, Andersen Yang, Elaine C Khoong
Altmetric score: 1Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 155 more from outside UCSF
Altmetric score: 5
Cited 1 timesRelated to: Networking and Information Technology R&D (NITRD), Bioengineering, Data Science
Using AI chatbots as clinical decision support for regional anesthesia: is the new era of “e-Consults” ready for primetime?
Regional Anesthesia & Pain Medicine,
Andrew Gray [last], and 3 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Patient Safety, Bioengineering, Machine Learning and Artificial Intelligence
Large language model trained on clinical oncology data predicts cancer progression
npj Digital Medicine,
Hui Lin, Olivier Morin, and 17 more from outside UCSF
Altmetric score: 14
Cited 2 timesRelated to: Lung Cancer, Clinical Research, Women's Health, Digestive Diseases, Breast Cancer, Urologic Diseases, Cancer, Rare Diseases, Lung, Colo-Rectal Cancer, Pancreatic Cancer, Prevention
Generative AI as Third Agent: Large Language Models and the Transformation of the Clinician-Patient Relationship
Journal of Participatory Medicine,
Hugo de O Campos, Daniel Wolfe, Hongzhou Luan, Ida Sim
Altmetric score: 1
Cited 1 timesRelated to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Clinical Research, Patient Safety
International partnership for governing generative artificial intelligence models in medicine
Nature Medicine,
Liang Zhao, and 32 more from outside UCSF
Altmetric score: 23PRECISION MEDICINE: CROSSING THE BIOMEDICAL SCALES WITH AI
The Journal of Precision Medicine Health and Disease,
Sharat Israni [first], Sergio E. Baranzini, John A. Capra, Marina Sirota, Christina V. Theodoris, Chun Jimmie Ye [last], and 1 more from outside UCSF
Related to: Precision Medicine, Human Genome, Prevention, Genetics, Machine Learning and Artificial Intelligence, Bioengineering, Networking and Information Technology R&D (NITRD)
Precision medicine: Crossing the biomedical scales with AI
The Journal of Precision Medicine Health and Disease,
Sharat Israni [first], Sergio E. Baranzini, John A. Capra, Marina Sirota, Christina V. Theodoris, Chun Jimmie Ye [last], and 1 more from outside UCSF
Cited 1 timesRelated to: Bioengineering, Precision Medicine, Machine Learning and Artificial Intelligence, Prevention, Genetics, Networking and Information Technology R&D (NITRD), Human Genome
Cross-institutional dental electronic health record entity extraction via generative artificial intelligence and synthetic notes
JAMIA Open,
Guo-Hao Lin, Ryan Brandon, and 5 more from outside UCSF
Cited 1 timesRelated to: Patient Safety, Networking and Information Technology R&D (NITRD), Health Services, Clinical Research, Machine Learning and Artificial Intelligence, Dental/Oral and Craniofacial Disease, Bioengineering, Data Science
Socratic AI: An Adaptive Tutor for Clinical Case Based Learning*
medRxiv,
Travis Zack, and 5 more from outside UCSF
Altmetric score: 3Related to: Clinical Research
Evaluating large language models for drafting emergency department encounter summaries
PLOS Digital Health,
Christopher Y. K. Williams, Jaskaran Bains, Tianyu Tang, Kishan Patel, Alexa N. Lucas, Fiona Chen, Brenda Y. Miao, Atul J. Butte, Aaron E. Kornblith
Cited 5 timesRelated to: Emergency Care
Development and Evaluation of a Computable Phenotype for Normal Tension Glaucoma
Ophthalmology Science,
Catherine Q. Sun, and 10 more from outside UCSF
Related to: Neurosciences, Networking and Information Technology R&D (NITRD), Clinical Research, Clinical Trials and Supportive Activities, Neurodegenerative, Machine Learning and Artificial Intelligence, Patient Safety, Aging
Harnessing AI in critical care: opportunities, challenges and key steps for success
Thorax,
Romain Pirracchio [last], and 2 more from outside UCSF
Cited 2 timesRelated to: Health Disparities and Racial or Ethnic Minority Health Research, Machine Learning and Artificial Intelligence, Bioengineering, Patient Safety, Networking and Information Technology R&D (NITRD)
Large language models for disease diagnosis: a scoping review
npj Artificial Intelligence,
Sirui Ding, and 16 more from outside UCSF
Altmetric score: 6
Cited 14 timesRelated to: Machine Learning and Artificial Intelligence
LLM‐based generation of USMLE‐style questions with ASPET/AMSPC knowledge objectives: All RAGs and no riches
British Journal of Clinical Pharmacology,
Rupa Lalchandani Tuan, and 3 more from outside UCSF
Related to: Cancer
Leveraging Natural Language Processing for Psychiatric Phenotyping from Spanish Electronic Health Records: Enabling the Investigation of Transdiagnostic Symptom Profiles at Scale
Complex Psychiatry,
Victor I. Reus, and 16 more from outside UCSF
Altmetric score:
Cited 1 timesRelated to: Bioengineering, Serious Mental Illness, Machine Learning and Artificial Intelligence, Mental Illness, Bipolar Disorder, Patient Safety, Clinical Research, Schizophrenia, Networking and Information Technology R&D (NITRD), Brain Disorders, Mental Health
Macy Foundation Innovation Report Part II: From Hype to Reality: Innovators’ Visions for Navigating AI Integration Challenges in Medical Education
Academic Medicine,
Brian C. Gin, Kate LaForge, Jesse Burk-Rafel, Christy K. Boscardin
Altmetric score: 2
Cited 1 timesRelated to: Machine Learning and Artificial Intelligence, Clinical Research, Networking and Information Technology R&D (NITRD), Bioengineering
Assessing the readiness of dental electronic health records for machine learning prediction of procedure outcomes: Insights from the bigmouth repository on composite and amalgam restoration survival rates
Journal of Dentistry,
Lauren Gritzer, and 6 more from outside UCSF
Related to: Bioengineering, Data Science, Dental/Oral and Craniofacial Disease, Comparative Effectiveness Research, Clinical Research, Patient Safety, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Precision Medicine
Accuracy and Reproducibility of ChatGPT Responses to Breast Cancer Tumor Board Patients
JCO Clinical Cancer Informatics,
Hope S. Rugo, and 17 more from outside UCSF
Altmetric score: 45Related to: Genetic Testing, Breast Cancer, Genetics, Women's Health, Cancer
Biomni: A General-Purpose Biomedical AI Agent
bioRxiv,
Peng He, and 22 more from outside UCSF
Altmetric score: 26
Cited 9 timesRelated to: Networking and Information Technology R&D (NITRD), Bioengineering
Biomni: A General-Purpose Biomedical AI Agent
bioRxiv,
Peng He, and 22 more from outside UCSF
Altmetric score: 18Related to: Biotechnology, Bioengineering
Artificial intelligence-enabled precision medicine for inflammatory skin diseases.
arXiv,
Alice Tang [first], Maria L Wei, Anna Haemel, Marina Sirota, Ernest Y Lee [last], and 1 more from outside UCSF
Altmetric score:Related to: Machine Learning and Artificial Intelligence, Data Science, Autoimmune Disease, Clinical Research, Psoriasis, Precision Medicine, Eczema / Atopic Dermatitis, Bioengineering, Networking and Information Technology R&D (NITRD), Infectious Diseases
Co-production of Diagnostic Excellence – Patients, Clinicians, and Artificial Intelligence; Comment on “Achieving Diagnostic Excellence: Roadmaps to Develop and Use Patient-Reported Measures With an Equity Lens”
International Journal of Health Policy and Management,
Sumant R. Ranji, Benjamin I. Rosner
Related to: Patient Safety, Networking and Information Technology R&D (NITRD), Bioengineering, Eye Disease and Disorders of Vision, Machine Learning and Artificial Intelligence, Clinical Research
Classifying the clinical significance of common breast pain symptoms using a large language model, ChatGPT (GPT-4)
Clinical Imaging,
Maggie Chung [last], and 2 more from outside UCSF
Related to: Chronic Pain, Pain Research, Breast Cancer, Cancer, Women's Health, Clinical Research
Robotic Process Automation in Laboratory Medicine
Clinical Chemistry,
Simone Arvisais-Anhalt, and 4 more from outside UCSF
Altmetric score: 1
Cited 1 times