UCSF AI Publications
Structuring medication signeturs as a language regression task: comparison of zero- and few-shot GPT with fine-tuned models
JAMIA Open,
Augusto Garcia-Agundez, Julia L Kay, Jing Li, Milena Gianfrancesco, Baljeet Rai, Angela Hu, Gabriela Schmajuk, Jinoos Yazdany
The Role of Virtual Reality and Artificial Intelligence in Cognitive Pain Therapy: A Narrative Review
Current Pain and Headache Reports,
James S. Khan, and 7 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Behavioral and Social Science, Rehabilitation, Pain Research, Bioengineering, Machine Learning and Artificial Intelligence, Mind and Body, Neurosciences, Chronic Pain
Reinforcement Learning for Robust Header Compression (ROHC) Under Model Uncertainty
IEEE Transactions on Machine Learning in Communications and Networking,
Shusen Jing [first], and 2 more from outside UCSF
A joint ESTRO and AAPM guideline for development, clinical validation and reporting of artificial intelligence models in radiation therapy
Radiotherapy and Oncology,
Mary Feng, and 17 more from outside UCSF
Altmetric score: 27
Cited 2 timesRelated to: Bioengineering, Networking and Information Technology R&D (NITRD), Radiation Oncology, Machine Learning and Artificial Intelligence, Cancer
Universal and extensible language-vision models for organ segmentation and tumor detection from abdominal computed tomography
Medical Image Analysis,
Kang Wang, Mehmet Can Yavuz, Yang Yang, and 8 more from outside UCSF
Altmetric score: 1
Cited 2 timesRelated to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering
ChatGPT-4 as a Board-Certified Surgeon: A Pilot Study
medRxiv,
Tejas Sathe, and 5 more from outside UCSF
Altmetric score: 8Related to: Patient Safety, Clinical Research
Evaluation of a Novel Large Language Model (LLM) Powered Chatbot for Oral-Boards Scenarios
medRxiv,
Riley Brian, Tejas S. Sathe [last], and 8 more from outside UCSF
Altmetric score: 5
Cited 1 timesRelated to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Patient Safety, Clinical Research, Women's Health
A standardized protocol using clinical adjudication to define true infection status in patients presenting to the emergency department with suspected infections and/or sepsis
Diagnostic Microbiology and Infectious Disease,
Helen Cristina Stankiewicz Karita, and 18 more from outside UCSF
Altmetric score: 4Related to: Sepsis, Hematology, Infectious Diseases, Clinical Research
More than a “characterizing flavor”: Menthol at subliminal levels in tobacco products
Drug and Alcohol Dependence,
Andre Luiz Oliveira da Silva, Lauren K Lempert, Stanton A Glantz
Altmetric score: 9Related to: Tobacco, Tobacco Smoke and Health
More than a “characterizing flavor”: Menthol at subliminal levels in tobacco products
Drug and Alcohol Dependence,
Andre Luiz Oliveira da Silva, Lauren K Lempert, Stanton A Glantz
Altmetric score: 9Related to: Tobacco, Tobacco Smoke and Health
Assessing Large Language Models for Oncology Data Inference from Radiology Reports
medRxiv,
Li-Ching Chen [first], Travis Zack, Madhumita Sushil, Brenda Miao, Corynn Kasap, Atul Butte, Eric A. Collisson, Julian Hong [last], and 1 more from outside UCSF
Related to: Precision Medicine, Rare Diseases, Orphan Drug, Pancreatic Cancer, Biomedical Imaging, Digestive Diseases, Cancer
Cell Maps for Artificial Intelligence: AI-Ready Maps of Human Cell Architecture from Disease-Relevant Cell Lines
bioRxiv,
Kirsten Obernier, Antoine Forget, Nevan Krogan, Andrej Sali, and 29 more from outside UCSF
Altmetric score: 1Related to: Genetics, Human Genome, Networking and Information Technology R&D (NITRD), Data Science, Bioengineering, Biotechnology, Machine Learning and Artificial Intelligence
A proximal enhancer regulates RORA expression during early human Th17 cell differentiation
Clinical Immunology,
Alexander Marson, and 13 more from outside UCSF
Altmetric score: 5Related to: Genetics, Human Genome
Towards consistency in pediatric brain tumor measurements: Challenges, solutions, and the role of artificial intelligence-based segmentation
Neuro-Oncology,
Susan M Chang, Sabine Mueller, Michael Prados, and 18 more from outside UCSF
Altmetric score: 3
Cited 1 timesRelated to: Bioengineering, Rare Diseases, Brain Disorders, Brain Cancer, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Orphan Drug, Cancer, Biomedical Imaging, Pediatric, Neurosciences
Generative AI Can Accurately Populate Vascular Quality Initiative Procedural Databases Using Narrative Operative Reports
Journal of Vascular Surgery,
Colleen P. Flanagan, Karen Trang, Joyce Nacario, Warren Gasper, Michael S. Conte, Peter Schneider, Elizabeth Wick, Allan M. Conway
Development and preliminary testing of Health Equity Across the AI Lifecycle (HEAAL): A framework for healthcare delivery organizations to mitigate the risk of AI solutions worsening health inequities
PLOS Digital Health,
Sara G. Murray, and 17 more from outside UCSF
Altmetric score: 2
Cited 2 timesRelated to: Bioengineering, Health Services, Networking and Information Technology R&D (NITRD), Data Science, Clinical Research, Machine Learning and Artificial Intelligence
Neuroecological links of the exposome and One Health
Neuron,
Agustin Ibanez [first], Harris A Eyre [last], and 12 more from outside UCSF
Altmetric score: 93
Cited 4 timesRelated to: Neurosciences
Neuroecological links of the exposome and One Health
Neuron,
Agustin Ibanez [first], Harris A Eyre [last], and 12 more from outside UCSF
Altmetric score: 93
Cited 4 timesRelated to: Neurosciences
Use of a Large Language Model to Assess Clinical Acuity of Adults in the Emergency Department
JAMA Network Open,
Christopher Y. K. Williams, Travis Zack, Brenda Y. Miao, Madhumita Sushil, Michelle Wang, Aaron E. Kornblith, Atul J. Butte
Altmetric score: 193
Cited 3 timesRelated to: Health Services, Clinical Research, Emergency Care
Applications of artificial intelligence in facial plastic and reconstructive surgery: a systematic review
Current Opinion in Otolaryngology & Head & Neck Surgery,
Spenser Souza [first], Rohith M. Bhethanabotla, and 1 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Clinical Research, Bioengineering
Vision–language foundation model for echocardiogram interpretation
Nature Medicine,
Neal Yuan, and 3 more from outside UCSF
Altmetric score: 105
Cited 2 timesRelated to: Bioengineering, Heart Disease, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Cardiovascular
Further Reflections on the Use of Large Language Models in Pediatrics
JAMA Pediatrics,
Yulin Hswen, and 2 more from outside UCSF
Assessing the Performance of Artificial Intelligence Models: Insights from the American Society of Functional Neuroradiology Artificial Intelligence Competition
American Journal of Neuroradiology,
Bin Jiang, Burak Berksu Ozkara, Guangming Zhu, Derek Boothroyd, Jason W Allen, Daniel P Barboriak, Peter Chang, Cynthia Chan, Ruchir Chaudhari, Hui Chen, Anjeza Chukus, Victoria Ding, David Douglas, Christopher G Filippi, Adam E Flanders, Ryan Godwin, Syed Hashmi, Christopher Hess, Kevin Hsu, Yvonne W Lui, Joseph A Maldjian, Patrik Michel, Sahil S Nalawade, Vishal Patel, Prashant Raghavan, Haris I Sair, Jody Tanabe, Kirk Welker, Christopher T Whitlow, Greg Zaharchuk, Max Wintermark
Altmetric score: 2Related to: Biomedical Imaging, Bioengineering, Traumatic Head and Spine Injury, Physical Injury - Accidents and Adverse Effects, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Neurosciences, Brain Disorders, Traumatic Brain Injury (TBI)
Attitudes of Jordanian Anesthesiologists and Anesthesia Residents towards Artificial Intelligence: A Cross-Sectional Study
Journal of Personalized Medicine,
Isam Bsisu [first], and 5 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Clinical Research
Ethical and regulatory challenges of large language models in medicine
The Lancet Digital Health,
Atul J Butte, and 10 more from outside UCSF
Altmetric score: 21
Cited 1 timesRelated to: Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence
How I GPT It: Development of Custom Artificial Intelligence (AI) Chatbots for Surgical Education
Journal of Surgical Education,
Tejas S Sathe [first], and 5 more from outside UCSF
Altmetric score: 16Related to: Bioengineering, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD)
Biomedical text readability after hypernym substitution with fine-tuned large language models
PLOS Digital Health,
Karl Swanson [first], and 9 more from outside UCSF
Artificial Intelligence in Cardiovascular Care — Part 2: Applications: JACC Review Topic of the Week
Journal of the American College of Cardiology,
James Pirruccello, Geoff Tison, and 19 more from outside UCSF
Altmetric score: 21Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Cardiovascular, Bioengineering
Evaluating Large Language Models for Drafting Emergency Department Discharge Summaries
medRxiv,
Christopher Y.K. Williams, Jaskaran Bains, Tianyu Tang, Kishan Patel, Alexa N. Lucas, Fiona Chen, Brenda Y. Miao, Atul J. Butte, Aaron E. Kornblith
Altmetric score: 1Related to: Emergency Care
Evaluating large language models as agents in the clinic
npj Digital Medicine,
Brenda Y. Miao, Eduardo Rodriguez Almaraz, Madhumita Sushil, Atul J. Butte, Ahmed Alaa [last], and 1 more from outside UCSF
Altmetric score: 22Related to: Bioengineering, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
Using generative AI to investigate medical imagery models and datasets
EBioMedicine,
Courtney R. Lyles, and 15 more from outside UCSF
Altmetric score: 1
Cited 1 timesRelated to: Bioengineering, Networking and Information Technology R&D (NITRD)
Contemporary attitudes and beliefs on coronary artery calcium from social media using artificial intelligence
npj Digital Medicine,
Sujana Balla, and 8 more from outside UCSF
Altmetric score: 8Related to: Cardiovascular, Heart Disease - Coronary Heart Disease, Networking and Information Technology R&D (NITRD), Prevention, Atherosclerosis, Heart Disease, Machine Learning and Artificial Intelligence
Zero-Shot Prompting is the Most Accurate and Scalable Strategy for Abstracting the Mayo Endoscopic Subscore from Colonoscopy Reports Using GPT-4
medRxiv,
Richard P. Yim, Vivek A. Rudrapatna
Altmetric score: 1Related to: Inflammatory Bowel Disease, Cancer, Digestive Diseases, Autoimmune Disease
Validation of the postoperative Quality of Recovery-15 questionnaire after emergency surgery and association with quality of life at three months
Journal canadien d'anesthésie,
Maxime Léger [last], and 8 more from outside UCSF
Related to: Patient Safety, Clinical Research, Rehabilitation
Artificial intelligence and skin cancer
Frontiers in Medicine,
Maria L. Wei [first], Mikio Tada, Alexandra So, and 1 more from outside UCSF
Related to: Health Disparities, Bioengineering, Machine Learning and Artificial Intelligence, Health Services, Cancer, Clinical Research, Networking and Information Technology R&D (NITRD)
The Limits of Clinician Vigilance as an AI Safety Bulwark
JAMA,
Julia Adler-Milstein [first], Robert M. Wachter [last], and 1 more from outside UCSF
Altmetric score: 81
Cited 2 timesRelated to: Machine Learning and Artificial Intelligence
Lessons Learned in Building Expertly Annotated Multi-Institution Datasets and Hosting the RSNA AI Challenges.
Radiology Artificial Intelligence,
Felipe Campos Kitamura, Luciano M Prevedello, Errol Colak, Safwan S Halabi, Matthew P Lungren, Robyn Ball, Jayashree Kalpathy-Cramer, Charles E Kahn, Tyler Richards, Jason F Talbott, George Shih, Hui Ming Lin, Katherine P Andriole, Maryam Vazirabad, Bradley J Erickson, Adam E Flanders, John Mongan
Altmetric score: 12Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
Harnessing the Power of Generative AI for Clinical Summaries: Perspectives From Emergency Physicians
Annals of Emergency Medicine,
Daniel J Shapiro, and 10 more from outside UCSF
Altmetric score: 2Related to: Emergency Care, Clinical Research
Algorithmic Identification of Treatment‐Emergent Adverse Events From Clinical Notes Using Large Language Models: A Pilot Study in Inflammatory Bowel Disease
Clinical Pharmacology & Therapeutics,
Madhumita Sushil, Balu Bhasuran, Dana Ludwig, James Buchanan, Atul J. Butte, Vivek A. Rudrapatna [last], and 12 more from outside UCSF
Altmetric score: 3Related to: Digestive Diseases, Inflammatory Bowel Disease, Autoimmune Disease, Patient Safety
Development of a liver disease-specific large language model chat interface using retrieval-augmented generation.
Hepatology,
Jin Ge, Steve Sun, Joseph Owens, Victor Galvez, Oksana Gologorskaya, Jennifer C Lai, Mark J Pletcher, Ki Lai
Cited 1 timesRelated to: Digestive Diseases, Liver Disease
Enhancing Health Care Communication With Large Language Models—The Role, Challenges, and Future Directions
JAMA Network Open,
Charumathi Raghu Subramanian [first], Raman Khanna [last], and 1 more from outside UCSF
Related to: Clinical Research, Health Services
Reporting Use of AI in Research and Scholarly Publication—JAMA Network Guidance
JAMA,
Romain Pirracchio, Yulin Hswen, Kirsten Bibbins-Domingo [last], and 3 more from outside UCSF
Altmetric score: 33
Cited 1 timesEnsuring useful adoption of generative artificial intelligence in healthcare
Journal of the American Medical Informatics Association,
Matthew P Lungren, and 2 more from outside UCSF
Altmetric score: 3
Cited 3 timesRelated to: Bioengineering, Networking and Information Technology R&D (NITRD), Health Services, Machine Learning and Artificial Intelligence, Clinical Research
An integrative approach to protein sequence design through multiobjective optimization
bioRxiv,
Lu Hong, Tanja Kortemme
Altmetric score: 4Related to: Networking and Information Technology R&D (NITRD)
Pearls and pitfalls in letters of recommendation for neurology residency applications
Journal of the Neurological Sciences,
Ryka R Sehgal [first], and 3 more from outside UCSF
Related to: Neurosciences
Systemic lupus in the era of machine learning medicine
Lupus Science & Medicine,
Irene Y Chen, and 4 more from outside UCSF
Related to: Autoimmune Disease, Data Science, Bioengineering, Networking and Information Technology R&D (NITRD), Lupus, Prevention, Machine Learning and Artificial Intelligence
The Brain Economy: Advancing Brain Science to Better Understand the Modern Economy
Malaysian Journal of Medical Sciences,
Harris A Eyre [first], Agustín Ibáñez, Steve Carnevale, Katrina Maestri, and 22 more from outside UCSF
Related to: Neurosciences, Behavioral and Social Science, Basic Behavioral and Social Science
Applying human-centered design to the construction of a cirrhosis management clinical decision support system
Hepatology Communications,
Jin Ge [first], Ana Buenaventura, Beth Berrean, Jory Purvis, Jennifer C. Lai, Mark J. Pletcher [last], and 1 more from outside UCSF
Altmetric score: 6Related to: Patient Safety, Clinical Research, Clinical Trials and Supportive Activities
Theory of radiologist interaction with instant messaging decision support tools: A sequential-explanatory study
PLOS Digital Health,
Marc D. Kohli, and 4 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Biomedical Imaging
Assessing supervisor versus trainee viewpoints of entrustment through cognitive and affective lenses: an artificial intelligence investigation of bias in feedback
Advances in Health Sciences Education,
Brian C. Gin, Olle ten Cate, Patricia S. O’Sullivan, Christy Boscardin
Related to: Clinical Research