UCSF AI Publications
Simulated Reasoning and Self-Verification in Generalist Large Language Models for Psychiatric Diagnostic Performance: Cross-Sectional Study
medRxiv,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Daniel F Becker, Anne L Glowinski, Andrew Krystal
Comparative Safety Profiles of Ocrelizumab and Rituximab in Multiple Sclerosis Treatment Using Real‐World Evidence
Annals of Neurology,
Gabriel Cerono, Bruce A.C. Cree, Stephen L. Hauser, Sergio E. Baranzini
Altmetric score: 9Related to: Brain Disorders, Multiple Sclerosis, Autoimmune Disease, Neurodegenerative, Clinical Research, Neurosciences
Development and evaluation of a lightweight large language model chatbot for medication enquiry
PLOS Digital Health,
Jasmine Chiat Ling Ong, Kathleen M. Giacomini, and 10 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD)
Development, optimization, and preliminary evaluation of a novel artificial intelligence tool to promote patient health literacy in radiology reports: The Rads-Lit tool
PLOS ONE,
Shin Mei Chan, and 9 more from outside UCSF
Related to: Bioengineering, Data Science, Biomedical Imaging, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Clinical Research, Patient Safety
Development, optimization, and preliminary evaluation of a novel artificial intelligence tool to promote patient health literacy in radiology reports: The Rads-Lit tool
PLOS ONE,
Shin Mei Chan, and 9 more from outside UCSF
Related to: Patient Safety, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Data Science, Bioengineering, Clinical Research, Machine Learning and Artificial Intelligence
Telehealth Care for People With Serious Illnesses and Preferred Languages Other Than English
JAMA Network Open,
Yidi Wang [first], Rebecca L. Sudore, Carly Zapata, Roman Martinez, Mara Quinn, Carrie Huang, Claudia Perez-Vaughan, Steven Z. Pantilat, Sarah Nouri [last], and 4 more from outside UCSF
Altmetric score: 1Related to: Health Disparities, Health Disparities and Racial or Ethnic Minority Health Research, Health Services, Aging, Clinical Research, Social Determinants of Health, Basic Behavioral and Social Science, Networking and Information Technology R&D (NITRD), Caregiving Research, Telehealth, Behavioral and Social Science
Guidelines for the Standardization of Adult Echocardiography Reporting: Recommendations From the American Society of Echocardiography
Journal of the American Society of Echocardiography,
Theodore Abraham, and 12 more from outside UCSF
Altmetric score: 34Related to: Data Science, Cardiovascular, Rare Diseases, Heart Disease, Congenital Heart Disease, Pediatric Research Initiative, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
Robustness tests for biomedical foundation models should tailor to specifications
npj Digital Medicine,
R. Patrick Xian [first], Noah R. Baker, Qiming Cui, A. Jay Holmgren, Madhumita Sushil, Reza Abbasi-Asl [last], and 2 more from outside UCSF
Altmetric score: 6
Cited 1 timesQuantifying device type and handedness biases in a remote Parkinson’s disease AI-powered assessment
npj Digital Medicine,
Irene Y. Chen, Peter Washington [last], and 4 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Neurosciences, Telehealth, Health Disparities, Parkinson's Disease, Bioengineering, Social Determinants of Health, Neurodegenerative, Brain Disorders, Health Disparities and Racial or Ethnic Minority Health Research, Networking and Information Technology R&D (NITRD), Aging, Clinical Research
PRIME 2.0: An Update to The Proposed Requirements for Cardiovascular Imaging-Related Machine Learning Evaluation Checklist
JACC Cardiovascular Imaging,
Rima Arnaout, and 19 more from outside UCSF
Altmetric score: 4
Cited 2 timesRelated to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Cardiovascular, Biomedical Imaging, Data Science, Bioengineering, Heart Disease
A Better Way: Initial Acceptability Testing of Using Artificial Intelligence Tools to Accelerate Development of Trauma Clinical Guidance
medRxiv,
Rochelle A. Dicker, and 59 more from outside UCSF
Cited 1 timesRelated to: Machine Learning and Artificial Intelligence, Bioengineering
A Better Way: Initial Acceptability Testing of Using Artificial Intelligence Tools to Accelerate Development of Trauma Clinical Guidance
medRxiv,
Rochelle A. Dicker, and 59 more from outside UCSF
Cited 1 timesRelated to: Bioengineering, Machine Learning and Artificial Intelligence
Perplexity and proximity: Large language model perplexity complements semantic distance metrics for the detection of incoherent speech
Journal of Biomedical Informatics,
Ellen R Bradley, Josh Woolley, and 8 more from outside UCSF
Altmetric score: 1Related to: Brain Disorders, Clinical Research, Bioengineering, Mental Illness, Serious Mental Illness, Behavioral and Social Science, Schizophrenia, Mental Health
Assessment of Large Language Models for Enhancing Diabetologist-Developed Personalized Treatment Plans in Complex Type 2 Diabetes
Clinical Diabetes,
Michelle Wang, Madhumita Sushil, Christopher Y.K. Williams, Brenda Y. Miao, Sarah Kim, Umesh Masharani, Gregory Ku, Victoria Hsiao, Aloukika Shah, Suneil K. Koliwad, Atul J. Butte
Altmetric score: 1Related to: Clinical Research, Precision Medicine, Diabetes
Explainable AI reveals tissue pathology and psychosocial drivers of opioid prescription for non-specific chronic low back pain
Scientific Reports,
Michelle W. Tong, Katharina Ziegeler, Virginie Kreutzinger, Sharmila Majumdar
Related to: Mental Health, Machine Learning and Artificial Intelligence, Health Disparities, Social Determinants of Health, Brain Disorders, Networking and Information Technology R&D (NITRD), Back Pain, Patient Safety, Chronic Pain, Opioids, Clinical Research, Pain Research, Health Disparities and Racial or Ethnic Minority Health Research, Substance Misuse, Precision Medicine, Behavioral and Social Science, Neurosciences, Opioid Misuse and Addiction
Assessment of Large Language Models for Enhancing Diabetologist-Developed Personalized Treatment Plans in Complex Type 2 Diabetes
Clinical Diabetes,
Michelle Wang, Madhumita Sushil, Christopher Y.K. Williams, Brenda Y. Miao, Sarah Kim, Umesh Masharani, Gregory Ku, Victoria Hsiao, Aloukika Shah, Suneil K. Koliwad, Atul J. Butte
Altmetric score: 1Related to: Precision Medicine, Diabetes
Educational Strategies for Clinical Supervision of Artificial Intelligence Use
New England Journal of Medicine,
Brian Gin, Christy K Boscardin [last], and 1 more from outside UCSF
Altmetric score: 279
Cited 9 timesRelated to: Bioengineering, Machine Learning and Artificial Intelligence
Redefining druggable targets with artificial intelligence
Nature Biotechnology,
Nevan Krogan, and 16 more from outside UCSF
Altmetric score: 42Related to: Machine Learning and Artificial Intelligence, Data Science, Bioengineering, Networking and Information Technology R&D (NITRD), Cancer
Clinical Applications of Artificial Intelligence in Corneal Diseases
Vision,
Hassan Asadigandomani, and 7 more from outside UCSF
Altmetric score: 1Related to: Eye Disease and Disorders of Vision, Machine Learning and Artificial Intelligence, Bioengineering, Data Science, Biomedical Imaging, Rare Diseases, Networking and Information Technology R&D (NITRD), Women's Health, Clinical Research
Clinical Applications of Artificial Intelligence in Corneal Diseases
Vision,
Hassan Asadigandomani, and 7 more from outside UCSF
Altmetric score: 1Related to: Bioengineering, Networking and Information Technology R&D (NITRD), Biomedical Imaging, Rare Diseases, Data Science, Clinical Research, Women's Health, Eye Disease and Disorders of Vision, Machine Learning and Artificial Intelligence
Establishing a policy statement on the use of artificial intelligence in neurosurgery
Neurosurgical Review,
Clemens M. Schirmer, and 9 more from outside UCSF
Cited 2 timesRelated to: Machine Learning and Artificial Intelligence, Bioengineering
Continuous Glucose Monitoring Data Analysis 2.0: Functional Data Pattern Recognition and Artificial Intelligence Applications
Journal of Diabetes Science and Technology,
Eda Cengiz, and 20 more from outside UCSF
Altmetric score: 1
Cited 3 timesRelated to: Bioengineering, Diabetes, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Data Science
Advancing Toward Clinical Deployment of AI-Generated Discharge Summaries—Beyond the Bench
JAMA Network Open,
Charumathi Raghu Subramanian, Benjamin I. Rosner
Altmetric score: 1Advancing Toward Clinical Deployment of AI-Generated Discharge Summaries—Beyond the Bench
JAMA Network Open,
Charumathi Raghu Subramanian, Benjamin I. Rosner
Altmetric score: 2Personalization of AI Using Personal Foundation Models Can Lead to More Precise Digital Therapeutics
JMIR AI,
Peter Washington
Related to: Data Science, Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence, Precision Medicine
Aiding Large Language Models Using Clinical Scoresheets for Neurobehavioral Diagnostic Classification From Text: Algorithm Development and Validation.
JMIR AI,
Peter Washington [last], and 6 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Mental Health, Bioengineering, Mental Illness, Machine Learning and Artificial Intelligence, Intellectual and Developmental Disabilities (IDD), Behavioral and Social Science, Brain Disorders, Autism, Data Science
“Artificial Intelligence and Its Impact on Radiology”
Journal of the American College of Radiology,
Brandon K K Fields, and 13 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
Comparative Analysis of LLMs in Dry Eye Syndrome Healthcare Information
Diagnostics,
Gloria Wu [first], and 3 more from outside UCSF
Cited 1 timesRelated to: Health Disparities, Eye Disease and Disorders of Vision, Health Disparities and Racial or Ethnic Minority Health Research, Women's Health, Bioengineering
Comparative Analysis of LLMs in Dry Eye Syndrome Healthcare Information
Diagnostics,
Gloria Wu [first], and 3 more from outside UCSF
Cited 1 timesRelated to: Eye Disease and Disorders of Vision, Health Disparities and Racial or Ethnic Minority Health Research, Women's Health, Bioengineering, Health Disparities
One shot at trust: building credible evidence for medical artificial intelligence
The Lancet Digital Health,
Julian C Hong, and 2 more from outside UCSF
Altmetric score: 19One shot at trust: building credible evidence for medical artificial intelligence
The Lancet Digital Health,
Julian C Hong, and 2 more from outside UCSF
Altmetric score: 20
Cited 1 timesSynthetic Scientific Image Generation with VAE, GAN, and Diffusion Model Architectures
Journal of Imaging,
Daniela Ushizima [last], and 7 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Biomedical Imaging, Machine Learning and Artificial Intelligence, Bioengineering
Synthetic Scientific Image Generation with VAE, GAN, and Diffusion Model Architectures
Journal of Imaging,
Daniela Ushizima [last], and 7 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering, Biomedical Imaging
Specialized AI and neurosurgeons in niche expertise: a proof-of-concept in neuromodulation with vagus nerve stimulation
Acta Neurochirurgica,
Sami Barrit [first], and 11 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Epilepsy, Neurodegenerative, Brain Disorders, Neurosciences, Machine Learning and Artificial Intelligence
Specialized AI and neurosurgeons in niche expertise: a proof-of-concept in neuromodulation with vagus nerve stimulation
Acta Neurochirurgica,
Sami Barrit [first], and 11 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Epilepsy, Brain Disorders, Neurosciences, Neurodegenerative
Integrated single-nuclei and spatial transcriptomic profiling of human sacrococcygeal teratomas reveals heterogeneity in cellular composition and X-chromosome inactivation
bioRxiv,
Ernesto J Rojas [first], Benjamin J Huang, Soo-Jin Cho, Marco A Cordero, Lan Vu, Tippi C MacKenzie, Diana J Laird [last], and 4 more from outside UCSF
Related to: Human Genome, Cancer Genomics, Stem Cell Research, Genetics, Cancer, Pediatric Research Initiative
Integrating Expert Knowledge into Large Language Models Improves Performance for Psychiatric Reasoning and Diagnosis
medRxiv,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Andrew Krystal, Daniel F Becker, Anne L Glowinski, Atul J Butte
Related to: Clinical Research
Integrating Expert Knowledge into Large Language Models Improves Performance for Psychiatric Reasoning and Diagnosis
medRxiv,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Andrew Krystal, Daniel F Becker, Anne L Glowinski, Atul J Butte
Cited 1 timesRelated to: Clinical Research
Current challenges and opportunities in active and passive data collection for mobile health sensing: a scoping review
JAMIA Open,
Peter Washington [last], and 5 more from outside UCSF
Cited 1 timesRelated to: Telehealth, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Bioengineering
Toward the Autonomous AI Doctor: Quantitative Benchmarking of an Autonomous Agentic AI Versus Board-Certified Clinicians in a Real World Setting
medRxiv,
Adam Z. Oskowitz [last], and 7 more from outside UCSF
Altmetric score: 7Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Health Services, Clinical Research
Auto-MedCalc: Automated Biomarkers Discovery and Risk Score Generation with AI Agents
bioRxiv,
Sirui Ding, Sanchita Bhattacharya, Atul J. Butte
Altmetric score: 3Related to: Cardiovascular, Health Disparities, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Heart Disease, Transplantation, Health Disparities and Racial or Ethnic Minority Health Research, Data Science, Bioengineering
Generative AI in hepatology: Transforming multimodal patient-generated data into actionable insights
Hepatology Communications,
Mason Lai [first], Jennifer C. Lai, Jin Ge [last], and 1 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Bioengineering, Patient Safety, Machine Learning and Artificial Intelligence, Clinical Research, Data Science
Benchmarking Large Language Models for Predictive Modeling in Biomedical Research With a Focus on Reproductive Health
bioRxiv,
Reuben Sarwal [first], Claire Dubin, Sanchita Bhattacharya, Atul Butte, Tomiko T Oskotsky, Marina Sirota [last], and 6 more from outside UCSF
Altmetric score: 2Related to: Infant Mortality, Networking and Information Technology R&D (NITRD), Contraception/Reproduction, Pediatric Research Initiative, Genetics, Data Science, Perinatal Period - Conditions Originating in Perinatal Period, Bioengineering
GAME: Genomic API for Model Evaluation
bioRxiv,
Shiron Drusinsky, Alexander Floren, Katherine S. Pollard, and 30 more from outside UCSF
Altmetric score: 13Related to: Genetics, Machine Learning and Artificial Intelligence, Bioengineering, Biotechnology, Networking and Information Technology R&D (NITRD), Human Genome
AI-Y: An AI Checklist for Population Ethics Across the Global Context
Current Epidemiology Reports,
Yulin Hswen [first], Margaret Hurley, Margaret A. Handley, and 7 more from outside UCSF
Altmetric score: 1Related to: Behavioral and Social Science, American Indian or Alaska Native, Minority Health, Primary Health Care, Social Determinants of Health, Clinical Research, Health Services, Health Disparities and Racial or Ethnic Minority Health Research, Prevention, Bioengineering, Dissemination and Implementation Research, Health Disparities, Machine Learning and Artificial Intelligence
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 39 more from outside UCSF
Altmetric score: 5Related to: Networking and Information Technology R&D (NITRD), Data Science
Evaluation of the accuracy and safety of machine translation of patient-specific discharge instructions: a comparative analysis
BMJ Quality & Safety,
Marianna Kong, Alicia Fernandez, Jaskaran Bains, Ana Milisavljevic, Katherine C Brooks, Akash Shanmugam, Leslie Avilez, Junhong Li, Vladyslav Honcharov, Andersen Yang, Elaine C Khoong
Altmetric score: 2
Cited 1 timesCognitive bias in clinical large language models
npj Digital Medicine,
Jenna Lester, and 4 more from outside UCSF
Altmetric score: 16
Cited 2 timesRelated to: Behavioral and Social Science, Patient Safety, Basic Behavioral and Social Science, Clinical Research
Announcing the Biomedical Data Translator: Initial Public Release
Clinical and Translational Science,
Sergio E. Baranzini, Sharat Israni, Karthik Soman, and 155 more from outside UCSF
Altmetric score: 5Related to: Networking and Information Technology R&D (NITRD), Data Science, Bioengineering
Evaluation of the accuracy and safety of machine translation of patient-specific discharge instructions: a comparative analysis
BMJ Quality & Safety,
Marianna Kong, Alicia Fernandez, Jaskaran Bains, Ana Milisavljevic, Katherine C Brooks, Akash Shanmugam, Leslie Avilez, Junhong Li, Vladyslav Honcharov, Andersen Yang, Elaine C Khoong
Altmetric score: 1