UCSF AI Publications
Predicting HIV viral non-suppression in Uganda: development and validation of machine learning and risk stratification models using routine EMR data
Frontiers in Artificial Intelligence,
Maria Magdalene Namaganda [first], Stathis Gennatas, and 10 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), HIV/AIDS, Machine Learning and Artificial Intelligence, Clinical Research, Infectious Diseases
PAUSE-Agents: A Clinician-in-the-Loop Multi-Agent AI Pipeline for ICU-to-Ward Handoff Briefs
medRxiv,
Lekshmi Santhosh, and 14 more from outside UCSF
Altmetric score: 1Autonomous biomedical research with an artificial intelligence agent
Science,
Peng He, and 27 more from outside UCSF
Altmetric score: 208
Cited 1 timesRelated to: Machine Learning and Artificial Intelligence, Bioengineering
Large language model-generated clinical summaries in emergency departments: A blinded comparison study
PLOS Digital Health,
Ahmed Alaa, Melanie Molina [last], and 2 more from outside UCSF
Altmetric score: 1Related to: Clinical Research, Emergency Care, Health Services
Integrating Nonpharmacologic Strategies for Pain with Inclusion, Respect, and Equity (INSPIRE): Cultural and linguistic tailoring for a digital health intervention
Internet Interventions,
Junlin Chen, Tess Fairchild, Kalisha Goodwin, Janice Tsoh, Adrian Aguilera, Jason M. Satterfield [last], and 1 more from outside UCSF
Altmetric score: 1Related to: Health Disparities and Racial or Ethnic Minority Health Research, Telehealth, Social Determinants of Health, Machine Learning and Artificial Intelligence, Rehabilitation, Clinical Trials and Supportive Activities, Complementary and Integrative Health, Pain Research, Chronic Pain, Health Disparities, Clinical Research, Networking and Information Technology R&D (NITRD), Minority Health, Behavioral and Social Science, Prevention
The 5R's of large language model‐assisted diagnosis: A practical framework for hospitalists
Journal of Hospital Medicine,
Peter Barish, Andrew D. Auerbach, Sumant R. Ranji
Altmetric score: 2Shifting from black box decisions to informed decision-making in using artificial intelligence to analyze prostate MRI
Abdominal Radiology,
Yuki Arita, and 9 more from outside UCSF
Related to: Prostate Cancer, Networking and Information Technology R&D (NITRD), Biomedical Imaging, Machine Learning and Artificial Intelligence, Bioengineering, Clinical Research, Urologic Diseases, Data Science, Cancer
A S.C.O.R.E. framework for evaluating open-ended responses from large language models in healthcare
Cell Reports Medicine,
Jasmine Ong, and 14 more from outside UCSF
Altmetric score: 1Related to: Clinical Research
Hepatology e-consult responses generated by artificial intelligence demonstrate accuracy but require human oversight
Hepatology Communications,
Holly K.T. Huang [first], Michelle Y. Li, Lisa X. Deng, Charles E. McCulloch, Mark J. Pletcher, Jennifer C. Lai, Bilal Hameed, Jin Ge [last], and 2 more from outside UCSF
Altmetric score: 4Related to: Liver Disease, Clinical Research, Digestive Diseases
Advances in LLM Reasoning Enable Flexibility in Clinical Problem-Solving.
AMIA Joint Summits on Translational Science Proceedings,
Kie Shidara [first], Danilo Bernardo [last], and 5 more from outside UCSF
Gaps in Patient-Facing Information on Artificial Intelligence in Cancer Care: A Cross-Sectional Analysis
JCO Clinical Cancer Informatics,
Ana I. Velazquez, Henry K. Litt [last], and 4 more from outside UCSF
Altmetric score: 1Related to: Bioengineering, Networking and Information Technology R&D (NITRD), Behavioral and Social Science, Clinical Research, Cancer, Machine Learning and Artificial Intelligence
Large language model chatbot-based text-to-SQL application for database analyses in liver diseases and hepatology research
JAMIA Open,
Aryana T Far [first], Steve Sun, Joseph Owens, Victor Galvez, Ma Somsouk, Jennifer C Lai, Ki Lai, Jin Ge [last], and 3 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Digestive Diseases, Liver Disease, Rare Diseases, Cancer, Liver Cancer, Networking and Information Technology R&D (NITRD)
The Utility of Large Language Models to Assist With Emergency Triage Decisions Within Otolaryngology
Otolaryngology,
Tokunbo Ayeni, and 14 more from outside UCSF
Related to: Clinical Research, Emergency Care, Health Services
Custom and Off-the-Shelf Large Language Models Routinely Misinterpret Implant Technique Guides
JBJS Open Access,
Stefano A. Bini, and 7 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence
Computable Structured Phenotype Versus Large Language Model Identification of Opioid Use Disorder Using Electronic Health Record Data
Annals of Emergency Medicine,
Melanie F Molina [first], Cynthia Fenton, Kathy T LeSaint, Michael A Kohn, Aaron E Kornblith [last], and 1 more from outside UCSF
Related to: Drug Abuse (NIDA only), Emergency Care, Brain Disorders, Opioid Misuse and Addiction, Substance Misuse, Clinical Research, Opioids
AI safety evaluation in an underrepresented population: real-world performance of clinical decision support and frontier language models on Medicaid patient messaging triage
Research Square,
Sanjay Basu [first], and 6 more from outside UCSF
Related to: Health Services, Clinical Research, Machine Learning and Artificial Intelligence, Patient Safety, Networking and Information Technology R&D (NITRD)
A Large Language Model for Extracting Post-marketing Adverse Drug Events from Clinical Notes in the Electronic Health Record
Drug Safety,
Dana Ludwig [first], Michelle Wang, Trang Trinh [last], and 1 more from outside UCSF
Altmetric score: 1Related to: Patient Safety
Redesigning trauma‐focused interventions to address capacity challenges in mental health systems
Journal of Traumatic Stress,
Nicholas Holder, and 3 more from outside UCSF
Altmetric score: 5Related to: Health Services, Brain Disorders, Clinical Research, Mental Illness, Anxiety Disorders, Comparative Effectiveness Research, Mental Health, Post-Traumatic Stress Disorder (PTSD)
Simulated Reasoning and Self-Verification for Psychiatric Diagnosis in Generalist Large Language Models: Comparative Evaluation
JMIR AI,
Karthik V Sarma, Kaitlin E Hanss, Andrew J M Halls, Daniel F Becker, Anne L Glowinski, Andrew D Krystal
Transforming Rheumatology Practice Applications of Generative Artificial Intelligence
Rheumatic Disease Clinics of North America,
Augusto Garcia-Agundez, Megan Creasman, Gabriela Schmajuk, Jinoos Yazdany
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD)
Mitigating hallucinations in healthcare AI: a systematic review of evidence-based strategies
BMC Health Services Research,
Sanjay Basu [first], and 1 more from outside UCSF
Altmetric score: 88Human-AI co-design for clinical prediction models
npj Digital Medicine,
Jean Feng [first], Avni Kothari, Patrick Vossler, Andrew Bishara, Lucas Zier, Newton Addo, Aaron Kornblith, and 2 more from outside UCSF
Altmetric score: 20Related to: Clinical Research, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering, Physical Injury - Accidents and Adverse Effects
AI-Assisted Formative Assessment in Clinical Education: From Algorithms to Agency
JMIR Medical Education,
Tina Mai [last], and 2 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Bioengineering, Networking and Information Technology R&D (NITRD)
Offline reinforcement learning for care management: addressing sparse rewards, temporal dependencies, and fairness in Medicaid populations
npj Digital Public Health,
Sanjay Basu [first], and 6 more from outside UCSF
Related to: Behavioral and Social Science, Health Disparities, Health Services, Health Disparities and Racial or Ethnic Minority Health Research, Basic Behavioral and Social Science, Clinical Research, Social Determinants of Health
Artificial Intelligence Tools in Psychiatric Education: Innovating While Maintaining Human Connection
Academic Psychiatry,
Andreea L. Seritan [first], and 10 more from outside UCSF
Altmetric score:Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Data Science
Emerging Applications of Traditional and Generative Artificial Intelligence in Liver Transplantation
Liver Transplantation,
William H. Ge [first], Andrew Bishara, Hillary Braun, Jin Ge [last], and 1 more from outside UCSF
Altmetric score: 4Related to: Transplantation, Digestive Diseases, Patient Safety, Liver Disease, Machine Learning and Artificial Intelligence, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Organ Transplantation, Data Science, Chronic Liver Disease and Cirrhosis, Precision Medicine, Clinical Research, Bioengineering
Edge-Hosted LLM-Assisted NICU Discharge Summary Generation: Field-Level Evaluation Using a Clinician-Defined Rubric
Healthcare,
Yao Sun, and 5 more from outside UCSF
Altmetric score: 1Related to: Perinatal Period - Conditions Originating in Perinatal Period, Pediatric Research Initiative, Clinical Research, Infant Mortality
Sources of Bias in Clinical Artificial Intelligence and Applications in Rheumatology
Rheumatic Disease Clinics of North America,
Megan Creasman, Augusto Garcia-Agundez, Jinoos Yazdany, Gabriela Schmajuk
Altmetric score: 2Related to: Arthritis, Machine Learning and Artificial Intelligence, Data Science, Autoimmune Disease, Networking and Information Technology R&D (NITRD), Health Disparities and Racial or Ethnic Minority Health Research
GIVersa-Endoscopy: A Large Language Model-Based AI Assistant for Endoscopy Sedation Triage
Clinical Gastroenterology and Hepatology,
Lakshmipriya Subbaraj, Albert Dang, Steve Sun, Joseph Owens, Ki Lai, Kendall Beck, Jin Ge
Altmetric score:Beyond translation: a patient-centered research agenda for artificial intelligence interpreter services in healthcare
npj Digital Medicine,
Alicia Fernandez, and 11 more from outside UCSF
Altmetric score: 2Related to: Clinical Research, Bioengineering, Machine Learning and Artificial Intelligence
Digital Media Use and Psychosocial Health among Adolescent Boys and Young Men
Current Psychiatry Reports,
Jason M. Nagata [first], Patrick Low, Eliot D. Lee, Selena Yu, Alicia W. Leong, Kevin Bao, Jennifer H. Wong, and 2 more from outside UCSF
Altmetric score: 15Related to: Social Determinants of Health, Prevention, Brain Disorders, Mental Health, Behavioral and Social Science, Pediatric Research Initiative, Machine Learning and Artificial Intelligence, Clinical Research, Adolescent Sexual Activity
Large language models to infer depression in patients with neurological conditions
BMJ Neurology Open,
Maya Julian-Kwong, Shane Poole, Kyra Henderson, Jaeleene Wijangco, Nikki Sisodia, Jeffrey Marc Gelfand, Chu-Yueh Guo, Riley Bove
Altmetric score: 1Related to: Brain Disorders, Depression, Autoimmune Disease, Mental Health, Multiple Sclerosis, Health Services, Clinical Research, Neurosciences, Neurodegenerative
Extracting adverse event nature, severity, timelines and resulting interventions from clinical notes of patients receiving CAR-T therapy using large language models
medRxiv,
Jordan Guillot, Brenda Miao, Arvind Suresh, Madhumita Sushil, Christopher Yk Williams, Rohit Vashisht, Tomiko T. Oskotsky, Marina Sirota, Atul J. Butte
Altmetric score: 2Related to: Patient Safety, Biotechnology, Gene Therapy, Genetics
Decreasing Administrative Effort Related to Non-Approval of Image-guidED Procedures Using Large Language Models – The DENIED-AI Pilot Study
Academic Radiology,
Xiao Wu, and 8 more from outside UCSF
The chief pharmacy officer’s role in integrating artificial intelligence across the enterprise
American Journal of Health-System Pharmacy,
Kendall Gross, and 4 more from outside UCSF
Altmetric score: 2Retrieval-Augmented Generation in Oncology: Promises, Pitfalls, and Early Applications
AI in Precision Oncology,
Julian Hong [last], and 9 more from outside UCSF
Altmetric score: 20Related to: Patient Safety, Human Genome, Cancer Genomics, Precision Medicine, Cancer, Genetics, Networking and Information Technology R&D (NITRD)
Deriving the OTA/AO fracture classification from routinely collected radiology reports using a large language model
OTA International The Open Access Journal of Orthopaedic Trauma,
Stephanie Hu [first], Timothy Keeley, Ryan Halvorson, Meir T. Marmor [last], and 7 more from outside UCSF
Related to: Biomedical Imaging
Performance of a large language model on the reasoning tasks of a physician
Science,
Robert Gallo, and 24 more from outside UCSF
Altmetric score: 1350
Cited 31 timesRelated to: Clinical Research, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD)
Large language models for automated and audience-tailored labeling of latent classes
JAMIA Open,
Fatemeh Gholi Zadeh Kharrat [first], Wolf Mehling, C Anthony Hunt, Jeffrey Lotz, Thomas A Peterson, and 60 more from outside UCSF
Related to: Clinical Research, Machine Learning and Artificial Intelligence, Neurosciences, Social Determinants of Health, Behavioral and Social Science, Chronic Pain, Back Pain, Mental Health, Pain Research, Basic Behavioral and Social Science
Large language models for automated and audience-tailored labeling of latent classes
JAMIA Open,
Fatemeh Gholi Zadeh Kharrat [first], Wolf Mehling, C Anthony Hunt, Jeffrey Lotz, Thomas A Peterson, Jeannie Bailey, Noah Bonnheim, Roland Krug, Conor O’Neill, and 56 more from outside UCSF
Related to: Chronic Pain, Social Determinants of Health, Behavioral and Social Science, Back Pain, Mental Health, Basic Behavioral and Social Science, Pain Research, Neurosciences, Clinical Research, Machine Learning and Artificial Intelligence
Problem representation in the age of artificial intelligence: the state of a dying art?
Diagnosis,
Gurpreet Dhaliwal, and 4 more from outside UCSF
Altmetric score: 2Related to: Machine Learning and Artificial Intelligence
Are LLM-generated plain language summaries truly understandable? A large-scale crowdsourced evaluation
Journal of Biomedical Informatics,
Jae Ho Sohn, and 3 more from outside UCSF
Cited 1 timesRelated to: Behavioral and Social Science, Machine Learning and Artificial Intelligence, Clinical Research, Basic Behavioral and Social Science
Use of the Dynamic Systems Development Method to Inform Technology-Assisted Motivational Interviewing (TAMI) for Tobacco Cessation: Qualitative Study
JMIR Formative Research,
Brian Borsari [first], Joannalyn Delacruz, John Layton, Karla D Llanes, Isaac A Mirzadegan, Jing Cheng, Anita S Hargrave-Bouagnon, Meredith C Meacham, Jason Satterfield [last], and 2 more from outside UCSF
Altmetric score: 1Related to: Behavioral and Social Science, Prevention, Cancer, Bioengineering, Dissemination and Implementation Research, Machine Learning and Artificial Intelligence, Substance Misuse, Networking and Information Technology R&D (NITRD), Tobacco Smoke and Health, Drug Abuse (NIDA only), Tobacco, Clinical Research
Pre‐Imaging Clinical Factors Associated With Cardiac MR Image Quality Using Large Language Model‐Enabled Data Extraction
Journal of Magnetic Resonance Imaging,
Hong Yu, Masha Bondarenko, Ali Nowroozi, Yoo Jin Lee, Adrian Serapio, Punita Kaveti, Jae Ho Sohn
Altmetric score: 4
Cited 1 timesRelated to: Cardiovascular, Biomedical Imaging, Bioengineering, Clinical Research, Patient Safety, Heart Disease
Pre‐Imaging Clinical Factors Associated With Cardiac MR Image Quality Using Large Language Model‐Enabled Data Extraction
Journal of Magnetic Resonance Imaging,
Hong Yu, Masha Bondarenko, Ali Nowroozi, Yoo Jin Lee, Adrian Serapio, Punita Kaveti, Jae Ho Sohn
Altmetric score: 4
Cited 1 timesRelated to: Bioengineering, Clinical Research, Patient Safety, Biomedical Imaging, Cardiovascular, Heart Disease
Updating Neurology® Journals' Policies on AI Use, Reporting of Genetic Studies, and Protocols for Systematic Review
Neurology,
Scott S Zamvil, and 9 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
ORION: An agentic reasoning construct for the analysis of complex human immune profiling
bioRxiv,
Aaron Jaech, Aaron Bodansky, Joseph L. DeRisi [last], and 4 more from outside UCSF
Altmetric score: 2Related to: Cancer Genomics, Autoimmune Disease, Human Genome, Biotechnology, Genetics, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Data Science, Cancer
ORION: An agentic reasoning construct for the analysis of complex human immune profiling
bioRxiv,
Aaron Jaech, Aaron Bodansky, Joseph DeRisi [last], and 4 more from outside UCSF
Related to: Autoimmune Disease, Genetics, Machine Learning and Artificial Intelligence, Biotechnology, Human Genome, Data Science, Networking and Information Technology R&D (NITRD)
What is diagnosis in the age of artificial intelligence
Diagnosis,
Christine Cassel [last], and 1 more from outside UCSF
Altmetric score: 1Related to: Clinical Research, Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence
Chatbot Responses to Frequently Asked Questions About Cannabis and Its Use for Cancer Symptoms
Journal of Pain and Symptom Management,
Donald I Abrams, and 9 more from outside UCSF
Altmetric score: 2Related to: Cannabinoid Research, Cancer