UCSF AI Publications
LLM‐based generation of USMLE‐style questions with ASPET/AMSPC knowledge objectives: All RAGs and no riches
British Journal of Clinical Pharmacology,
Rupa Lalchandani Tuan, and 3 more from outside UCSF
Related to: Cancer
Accuracy and Reproducibility of ChatGPT Responses to Breast Cancer Tumor Board Patients
JCO Clinical Cancer Informatics,
Hope S. Rugo, and 17 more from outside UCSF
Altmetric score: 38Related to: Cancer, Breast Cancer, Women's Health
Biomni: A General-Purpose Biomedical AI Agent
bioRxiv,
Peng He, and 22 more from outside UCSF
Altmetric score: 18Related to: Biotechnology, Bioengineering
Classifying the clinical significance of common breast pain symptoms using a large language model, ChatGPT (GPT-4)
Clinical Imaging,
Maggie Chung [last], and 2 more from outside UCSF
Related to: Women's Health, Chronic Pain, Pain Research, Clinical Research, Breast Cancer, Cancer
Assessing the Accuracy and Reliability of Large Language Models in Psychiatry Using Standardized Multiple-Choice Questions: Cross-Sectional Study
Journal of Medical Internet Research,
Kaitlin Hanss, Karthik V Sarma, Anne L Glowinski, Andrew Krystal, Ramotse Saunders, Andrew Halls, Sasha Gorrell, Erin Reilly
Related to: Mental Health, Mental Illness, Behavioral and Social Science
Diagnostic Performance of Publicly Available Large Language Models in Corneal Diseases: A Comparison with Human Specialists
Diagnostics,
Hassan Asadigandomani, and 11 more from outside UCSF
Altmetric score: 1Related to: Eye Disease and Disorders of Vision
Clinical Value of ChatGPT for Epilepsy Presurgical Decision-Making: Systematic Evaluation of Seizure Semiology Interpretation
Journal of Medical Internet Research,
Vikram R Rao, and 14 more from outside UCSF
Altmetric score: 104Related to: Epilepsy, Brain Disorders, Neurosciences, Neurodegenerative, Clinical Research
Dall-E in hand surgery: Exploring the utility of ChatGPT image generation
Surgery Open Science,
Daniel Soroudi [first], Daniel S. Rouhani, Alap Patel, Ryan Sadjadi, Reta Behnam-Hanona, Israel Falade, Merisa Piper, Scott L. Hansen [last], and 1 more from outside UCSF
Related to: Bioengineering
On the use of natural language processing to implement the target trial framework using unstructured data from the electronic health record
Global Epidemiology,
Milena Gianfrancesco, and 2 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Health Services, Data Science, Clinical Research, Clinical Trials and Supportive Activities, Patient Safety, Networking and Information Technology R&D (NITRD)
Cross-Institutional Evaluation of Large Language Models for Radiology Diagnosis Extraction: A Prompt-Engineering Perspective
Journal of Imaging Informatics in Medicine,
Sina Houshmand, and 12 more from outside UCSF
Altmetric score: 4AI and inclusion in simulation education and leadership: a global cross-sectional evaluation of diversity
Advances in Simulation,
Odmara L. Barreto Chang, and 11 more from outside UCSF
Altmetric score: 2
Cited 1 timesRelated to: Minority Health, Health Disparities
Physician- and Large Language Model–Generated Hospital Discharge Summaries
JAMA Internal Medicine,
Christopher Y. K. Williams, Charumathi Raghu Subramanian, Syed Salman Ali, Michael Apolinario, Elisabeth Askin, Peter Barish, Monica Cheng, W. James Deardorff, Nisha Donthi, Smitha Ganeshan, Owen Huang, Molly A. Kantor, Andrew R. Lai, Ashley Manchanda, Kendra A. Moore, Anoop N. Muniyappa, Geethu Nair, Prashant P. Patel, Lekshmi Santhosh, Susan Schneider, Shawn Torres, Michi Yukawa, Colin C. Hubbard, Benjamin I. Rosner
Altmetric score: 42
Cited 3 timesRelated to: Clinical Research
Assessing Variability in ChatGPT Responses: A Case Study on Simulating Online User Inputs.
Journal of the Association of Nurses in AIDS Care,
Yulin Hswen, Thu Nguyen
Related to: Clinical Research, Networking and Information Technology R&D (NITRD), Behavioral and Social Science, Machine Learning and Artificial Intelligence, Health Disparities, Minority Health
State of the art review of AI in renal imaging
Abdominal Radiology,
Fatemeh Dehghani Firouzabadi, and 5 more from outside UCSF
Altmetric score: 4
Cited 1 timesRelated to: Kidney Disease, Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Bioengineering, Cancer, Rare Diseases, Data Science
Detecting New Lesions Using a Large Language Model: Applications in Real‐World Multiple Sclerosis Datasets
Annals of Neurology,
Shane Poole [first], Nikki Sisodia, Kanishka Koshal, Kyra Henderson, Jaeleene Wijangco, Danelvis Paredes, Chelsea Chen, William Rowles, Amit Akula, UCSF Multiple Sclerosis and Neuroinflammation Center clinicians, Andreas M. Rauschecker, Roland G. Henry, Riley Bove [last], and 2 more from outside UCSF
Altmetric score: 7Related to: Autoimmune Disease, Neurosciences, Clinical Research, Brain Disorders, Patient Safety, Multiple Sclerosis, Neurodegenerative, Biomedical Imaging
Explainable differential diagnosis with dual-inference large language models
npj Health Systems,
Sirui Ding, and 7 more from outside UCSF
Altmetric score: 3
Cited 2 timesUnderstanding contraceptive switching rationales from real world clinical notes using large language models
npj Digital Medicine,
Brenda Y. Miao [first], Christopher Y. K. Williams, Ebenezer Chinedu-Eneh, Travis Zack, Atul J. Butte, Irene Y. Chen [last], and 1 more from outside UCSF
Cited 1 timesRelated to: Prevention, Patient Safety, Clinical Research
Ontology accelerates few-shot learning capability of large language model: A study in extraction of drug efficacy in a rare pediatric epilepsy
International Journal of Medical Informatics,
Joseph E Sullivan, and 18 more from outside UCSF
Related to: Pediatric, Down Syndrome, Neurosciences, Orphan Drug, Epilepsy, Brain Disorders, Intellectual and Developmental Disabilities (IDD), Neurodegenerative, Rare Diseases
Investigating CAR-T Treatment Access for Multiple Myeloma Patients Using Real-World Evidence
medRxiv,
Jaysón Davidson, Anupama Kumar, Ayan Patel, Irene Y. Chen, Atul J. Butte, Travis Zack
Altmetric score: 1Related to: Hematology, Clinical Research, Minority Health, Cancer, Health Disparities, Rare Diseases
Towards multimodal foundation models in molecular cell biology
Nature,
Hani Goodarzi, and 8 more from outside UCSF
Altmetric score: 143
Cited 1 timesRelated to: Networking and Information Technology R&D (NITRD), Biotechnology, Human Genome, Bioengineering, Genetics
Information Extraction from Lumbar Spine MRI Radiology Reports Using GPT4: Accuracy and Benchmarking Against Research-Grade Comprehensive Scoring
Diagnostics,
Katharina Ziegeler, Virginie Kreutzinger, Michelle W. Tong, Cynthia T. Chin, Emma Bahroos, Po-Hung Wu, Noah Bonnheim, Aaron J. Fields, Jeffrey C. Lotz, Thomas M. Link, Sharmila Majumdar
Related to: Back Pain, Neurosciences, Pain Research, Bioengineering, Biomedical Imaging
A proof-of-concept study for patient use of open notes with large language models
JAMIA Open,
Jennifer L Clarke, and 7 more from outside UCSF
Altmetric score: 8
Cited 1 timesGender Disparities in Artificial Intelligence–Generated Images of Hospital Leadership in the United States
Mayo Clinic Proceedings Digital Health,
Odmara L. Barreto Chang, and 9 more from outside UCSF
Related to: Bioengineering, Machine Learning and Artificial Intelligence
A proof-of-concept study for patient use of open notes with large language models
JAMIA Open,
Jennifer L Clarke, and 7 more from outside UCSF
Altmetric score:Multimodal cell maps as a foundation for structural and functional genomics
Nature,
Abantika Pal, Neelesh Soni, Andrew P. Latham, Aji Palar, Ernst Pulido, Ignacia Echeverria, Andrej Sali, and 27 more from outside UCSF
Altmetric score: 247
Cited 6 timesRelated to: Cancer
A Narrative Review on the Application of Large Language Models to Support Cancer Care and Research
Yearbook of Medical Informatics,
Ryzen Benson, Marianna Elia, Benjamin Hyams, Ji Hyun Chang, Julian C. Hong
Altmetric score: 5
Cited 1 timesRelated to: Cancer
Evaluating the effectiveness of biomedical fine-tuning for large language models on clinical tasks
Journal of the American Medical Informatics Association,
Madhumita Sushil, and 9 more from outside UCSF
Altmetric score: 3
Cited 3 timesA clinically accessible small multimodal radiology model and evaluation metric for chest X-ray findings
Nature Communications,
Matthew P. Lungren, and 26 more from outside UCSF
Altmetric score: 5
Cited 1 timesRelated to: Biomedical Imaging
Can we rely on artificial intelligence to guide antimicrobial therapy? A systematic literature review
Antimicrobial Stewardship & Healthcare Epidemiology,
Pedro S. Marra, and 19 more from outside UCSF
Altmetric score: 13Related to: Biodefense, Networking and Information Technology R&D (NITRD), Bioengineering, Antimicrobial Resistance, Infectious Diseases, Patient Safety, Emerging Infectious Diseases, Machine Learning and Artificial Intelligence
Artificial intelligence: international perspectives on critical issues
OTA International The Open Access Journal of Orthopaedic Trauma,
Meir T. Marmor [first], Justin Krogue, and 4 more from outside UCSF
Changes in fatigue after first-ever ischemic stroke and their associations with changes in physical fitness, body composition, and physical activity
Journal of Stroke and Cerebrovascular Diseases,
Caryl L Gay, and 6 more from outside UCSF
Altmetric score:Related to: Cardiovascular, Rehabilitation, Brain Disorders, Cerebrovascular, Aging, Physical Activity, Prevention, Stroke
Real-World Type 2 Diabetes Second-Line Treatment Allocation Among Patients
medRxiv,
Jaysón Davidson, Rohit Vashisht, Kendra Radtke, Ayan Patel, Suneil K. Koliwad, Atul J. Butte
Altmetric score: 1Related to: Diabetes, Behavioral and Social Science, Health Disparities, Clinical Research
Dietary Sugar and Atopic Dermatitis in a Longitudinal Birth Cohort
JID Innovations,
Judy Shan [first], Morgan Ye, Sheng-Pei Wang, Hannah Kang, Ahnna Lee, Erin L. Van Blarigan, Katrina Abuabara [last], and 1 more from outside UCSF
Related to: Nutrition, Clinical Research, Eczema / Atopic Dermatitis, Pediatric
A scoping review on generative AI and large language models in mitigating medication related harm
npj Digital Medicine,
Jasmine Chiat Ling Ong [first], Rosa Rodriguez-Monguio, and 9 more from outside UCSF
Altmetric score: 12Related to: Machine Learning and Artificial Intelligence, Patient Safety
23 Generative artificial intelligence for automated unstructured MRI data extraction in prostate cancer care
Journal of Clinical and Translational Science,
William Pace, Andrew Liu, Marvin Carlisle, Robert Krumm, Janet Cowan, Peter Carroll, Matthew Cooperberg, Anobel Odisho
Related to: Aging, Cancer, Biomedical Imaging, Urologic Diseases, Patient Safety, Prostate Cancer, Networking and Information Technology R&D (NITRD)
Interactive Panel Summaries of the 2024 Voice AI Symposium
Frontiers in Digital Health,
Anita Ho, and 81 more from outside UCSF
Altmetric score: 1Exploring Vacuum Erection Device User Feedback: A GPT-4 Thematic Analysis
Urology,
Hiren V Patel [first], Behzad Abbasi, Kevin D Li, Marvin Carlisle, William A Pace, Benjamin N Breyer [last], and 1 more from outside UCSF
Biomedical data and AI
Science China Life Sciences,
Hao Li, and 29 more from outside UCSF
Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods
STAR Protocols,
Christina Yau, The Cancer Genome Atlas Analysis Network, and 78 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Biotechnology, Genetics
Large language model agents can use tools to perform clinical calculations
npj Digital Medicine,
Simon N. Chu, and 3 more from outside UCSF
Altmetric score: 14
Cited 2 timesRelated to: Clinical Research
Enhancing Large Language Models with Retrieval-Augmented Generation: A Radiology-Specific Approach.
Radiology Artificial Intelligence,
Andreas M Rauschecker [last], and 1 more from outside UCSF
Altmetric score: 32
Cited 2 timesIs ‘data science’ science?
Advances in Health Sciences Education,
Patricia O’Sullivan [last], and 1 more from outside UCSF
Related to: Data Science
Non-Face-to-Face Services in Neurologic Care
Seminars in Neurology,
Carrie K. Grouse
Related to: Patient Safety
irAE-GPT: Leveraging large language models to identify immune-related adverse events in electronic health records and clinical trial datasets
medRxiv,
Michelle Wang, Sam Brondfield, Jordyn Silverstein, Kimberly de Dios, Zoe Quandt [last], and 15 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Patient Safety, Cancer, Minority Health, Clinical Research, Health Disparities, Immunotherapy
Implementing Social Determinants of Health Screening in US Emergency Departments
JAMA Network Open,
Melanie Molina, and 7 more from outside UCSF
Altmetric score: 4Related to: Clinical Research, Emergency Care, Health Disparities, Health Services, Behavioral and Social Science, Minority Health
Applications of Artificial Intelligence and Advanced Imaging in Pediatric Diffuse Midline Glioma
Neuro-Oncology,
Atlas Haddadi Avval [first], Suneel Banerjee, Sabine Mueller, Andreas M Rauschecker [last], and 2 more from outside UCSF
Altmetric score: 2Related to: Clinical Research, Rare Diseases, Neurosciences, Brain Cancer, Bioengineering, Machine Learning and Artificial Intelligence, Brain Disorders, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Precision Medicine, Data Science, Cancer
National trends in oncology specialists’ EHR inbox work, 2019–2022
Journal of the National Cancer Institute,
A Jay Holmgren [first], and 3 more from outside UCSF
Altmetric score: 9Related to: Patient Safety, Cancer, Clinical Research, Pediatric
Physician clinical decision modification and bias assessment in a randomized controlled trial of AI assistance
Communications Medicine,
Elaine C. Khoong, and 6 more from outside UCSF
Altmetric score: 3
Cited 1 timesRelated to: Patient Safety, Health Disparities, Minority Health, Clinical Research, Clinical Trials and Supportive Activities, Pain Research
Guiding Principles for Data Sharing and Harmonization: Results of a Systematic Review and Modified Delphi From the Society of Critical Care Medicine Data Science Campaign
Critical Care Medicine,
Heidi J. Engel, and 25 more from outside UCSF
Altmetric score: 13Related to: Data Science
Analyzing patient perspectives with large language models: a cross-sectional study of sentiment and thematic classification on exception from informed consent
Scientific Reports,
Aaron E. Kornblith [first], Chandan Singh, and 13 more from outside UCSF
Altmetric score: 4