UCSF AI Publications
Advanced Prompting Techniques Informed by Clinical Expertise Improve the Accuracy of LLM Data Extraction but Increase Non-Determinism
Journal of Imaging Informatics in Medicine,
Yifei Wang [first], Carly Stewart, Matthew Malekhedayat, Jason Luong, Rebecca Smith-Bindman, John Mongan [last], and 1 more from outside UCSF
Related to: Clinical Research
Integrating Artificial Intelligence in Periodontal Diagnosis: A Comparative Evaluation of ChatGPT‐4 and Dental Educators
Journal of Dental Education,
Eva Bender, and 10 more from outside UCSF
Related to: Infectious Diseases, Dental/Oral and Craniofacial Disease, Machine Learning and Artificial Intelligence, Bioengineering, Clinical Research
Will AI keep you out of trouble? An expert panel review of LLMs for hazardous regional anesthesia consults
Journal of Clinical Anesthesia,
Andrew Gray, and 7 more from outside UCSF
Related to: Patient Safety
Artificial Intelligence in Surgical Feedback: A Systematic Scoping Review
Journal of Surgical Education,
Patrick Barba, Stephanie Younan, Kimberley Luu
Related to: Bioengineering, Networking and Information Technology R&D (NITRD), Health Disparities, Health Disparities and Racial or Ethnic Minority Health Research, Machine Learning and Artificial Intelligence
Bidirectional data harmonization across the multiple chronic disease disparities research consortium: A pipeline description of opportunities and challenges
Journal of Biomedical Informatics,
Hyelee Kim, Shuang Liang, Kathy Lanier, Sarit Helman, Niloufar Ameli, Sepideh Banava, Nancy Fan Cheng, Jason Boyce, Yulin Hswen, Catherine E Oldenburg, Kim F Rhoads, Edwin D Charlebois, Stuart A Gansky, William Brown Iii
Related to: Behavioral and Social Science, Health Disparities and Racial or Ethnic Minority Health Research, Precision Medicine, Social Determinants of Health
Reporting checklist for foundation and large language models in medical research (REFINE): an international consensus guideline
Diagnostic and Interventional Radiology,
Ali S Tejani, and 56 more from outside UCSF
Cited 1 timesRelated to: Biomedical Imaging, Cancer, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD)
Large language models in trauma anesthesia education
Current Opinion in Anaesthesiology,
Elodie Lang, Tyler J. Law [last], and 1 more from outside UCSF
Cited 1 timesReflecting on 25 years of SPIKES: Bad News Communication in Our Modern Era
The Oncologist,
Mazie Tsang [last], and 1 more from outside UCSF
CDR-Agent: Intelligent Selection and Execution of Clinical Decision Rules Using Large Language Model Agents.
AMIA Annual Symposium Proceedings,
Aaron E Kornblith, Margaret J Lin-Martore, Jasmanpreet C Kaur, Vasuda M Dokiparthi, and 5 more from outside UCSF
Cited 1 timesRelated to: Emergency Care
Knowledge augmented causal discovery through large language models and knowledge graphs: application in chronic low back pain
medRxiv,
Conor O’Neill, Jeffrey C Lotz, Abel Torres-Espin [last], and 3 more from outside UCSF
Altmetric score: 1Related to: Back Pain, Pain Research, Bioengineering, Chronic Pain
Benchmarking large language models for predictive modeling in biomedical research with a focus on reproductive health
Cell Reports Medicine,
Reuben Sarwal [first], Claire A Dubin, Sanchita Bhattacharya, Atul Butte, Tomiko T Oskotsky, Marina Sirota [last], and 6 more from outside UCSF
Altmetric score: 129Related to: Perinatal Period - Conditions Originating in Perinatal Period, Contraception/Reproduction, Prevention, Pediatric Research Initiative, Infant Mortality
Large language models provide unsafe answers to patient-posed medical questions
npj Digital Medicine,
Jessica Evert, and 16 more from outside UCSF
Altmetric score: 6
Cited 2 timesArtificial intelligence-enabled precision medicine for inflammatory skin diseases.
Journal of Investigative Dermatology,
Alice S Tang [first], Maria L Wei, Anna Haemel, Marina Sirota, Ernest Y Lee [last], and 1 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Data Science, Eczema / Atopic Dermatitis, Autoimmune Disease, Bioengineering, Clinical Research, Precision Medicine, Psoriasis
Community health workers and social media: benefits, drawbacks, and training needs
mHealth,
Mallory O. Johnson, Parya Saberi, and 6 more from outside UCSF
Related to: Health Disparities, Prevention, Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Health Services, Social Determinants of Health, Health Disparities and Racial or Ethnic Minority Health Research, Behavioral and Social Science, Clinical Research
Community health workers and social media: benefits, drawbacks, and training needs
mHealth,
Mallory O. Johnson, Parya Saberi, and 6 more from outside UCSF
Altmetric score:Related to: Health Services, Health Disparities and Racial or Ethnic Minority Health Research, Social Determinants of Health, Prevention, Machine Learning and Artificial Intelligence, Behavioral and Social Science, Networking and Information Technology R&D (NITRD), Clinical Research, Health Disparities
MetaMind: A multi-agent transformer-driven framework for automated network meta-analyses
PLOS ONE,
Vivek Rudrapatna, and 10 more from outside UCSF
Altmetric score: 1Related to: Digestive Diseases, Crohn's Disease, Autoimmune Disease, Inflammatory Bowel Disease
Incidence, contributing factors, and predictors of diagnostic errors in medical inpatients: A retrospective cohort study
Journal of Hospital Medicine,
Gurpreet Dhaliwal, and 9 more from outside UCSF
Related to: Cancer, Patient Safety, Clinical Research, Women's Health
Medical school admissions competencies: what problems need to be solved?
Academic Medicine,
Karen E Hauer, Erick Hung
Altmetric score: 1Scaling medical device regulatory science using large language models
npj Digital Medicine,
Patrick Vossler, Jean Feng [last], and 5 more from outside UCSF
Altmetric score: 2
Cited 1 timesRelated to: Assistive Technology, Patient Safety, Machine Learning and Artificial Intelligence, Bioengineering, Data Science, Networking and Information Technology R&D (NITRD)
Exploring the Past and Current Landscape of Biomarker-Driven Clinical Trials Through Large Language Models
JCO Clinical Cancer Informatics,
Margaret Guo [first], Brenda Miao, Atul Butte, Travis Zack [last], and 2 more from outside UCSF
Related to: Patient Safety, Genetics, Clinical Trials and Supportive Activities, Cancer Genomics, Clinical Research, Precision Medicine, Cancer, Human Genome
Comparative evaluation of large language models for hip fracture-related patient questions: DeepSeek-V3-FW, Gemini 2.0 Flash, and ChatGPT-4.5
Digital Health,
Theodore Miclau, and 12 more from outside UCSF
Related to: Health Services, Patient Safety, Clinical Research
MedEvalarena: A Self-Generated, Peer-Judged Benchmark for Medical Reasoning
medRxiv,
Kie Shidara, Esmé Wheeler, Danilo Bernardo [last], and 4 more from outside UCSF
Altmetric score: 1Text-Driven Tumor Synthesis
IEEE Transactions on Medical Imaging,
Kang Wang, Yang Yang, and 12 more from outside UCSF
Altmetric score:Related to: Cancer, Biomedical Imaging
Interdisciplinary expertise to advance human-centered explainable AI
Social Science & Medicine,
Courtney Lyles [last], and 11 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Basic Behavioral and Social Science, Behavioral and Social Science
Care Team Model and Diagnostic Error Risk in Medical Patients Who Transferred to the ICU or Died
Journal of General Internal Medicine,
Colin Hubbard, Andrew Auerbach [last], and 4 more from outside UCSF
Altmetric score: 18Related to: Patient Safety
Using an Open–Source Large Language Model to Predict Current Procedural Terminology Codes from Interventional Radiology Post-Procedural Notes
Journal of Vascular and Interventional Radiology,
Xiao Wu, Jae Ho Sohn [last], and 1 more from outside UCSF
Altmetric score: 7Evaluation of large language models for diagnostic impression generation from brain MRI report findings: a multicenter benchmark and reader study
npj Digital Medicine,
Xue Wu, and 11 more from outside UCSF
Related to: Clinical Research, Neurosciences, Biomedical Imaging
Large Language Models in Radiologic Numerical Tasks: A Thorough Evaluation and Error Analysis
Journal of Imaging Informatics in Medicine,
Ali Nowroozi [first], Masha Bondarenko, Adrian Serapio, Tician Schnitzler, Jae Ho Sohn [last], and 1 more from outside UCSF
Related to: Biomedical Imaging
Large Language Models in Radiologic Numerical Tasks: A Thorough Evaluation and Error Analysis
Journal of Imaging Informatics in Medicine,
Ali Nowroozi [first], Masha Bondarenko, Adrian Serapio, Tician Schnitzler, Jae Ho Sohn [last], and 1 more from outside UCSF
Related to: Biomedical Imaging
The Importance of Artificial Intelligence Literacy in Nursing and Midwifery to Achieve the Sustainable Development Goals: Perspectives From the 80th Session of the United Nations General Assembly
Journal of Nursing Scholarship,
Jerry John Ouner, and 8 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence
Agentic AI in Radiology: Evolution from Large Language Models to Future Clinical Integration.
Radiology Artificial Intelligence,
Ali Tejani, and 8 more from outside UCSF
Altmetric score: 8Related to: Machine Learning and Artificial Intelligence, Clinical Research, Biomedical Imaging, Patient Safety, Bioengineering, Networking and Information Technology R&D (NITRD)
Quantifying the impact of a computer‐aided diagnostic score on the clinical diagnosis of functional seizures
Epilepsia,
Adriana Y. Koek, Di Sun, and 37 more from outside UCSF
Altmetric score: 16Related to: Brain Disorders, Clinical Research, Neurosciences, Machine Learning and Artificial Intelligence, Epilepsy, Neurodegenerative
P-2001. Integrating a host biomarker and a large language model for diagnosis of lower respiratory tract infection
Open Forum Infectious Diseases,
Natasha Spottiswoode, Hoang Van Phan, Emily Lydon, Victoria Chu, Adolfo Cuesta, Alexander Kazberouk, Natalie Richmond, Carolyn Calfee, Chaz Langelier
Related to: Acute Respiratory Distress Syndrome, Rare Diseases, Infectious Diseases, Clinical Research, Lung
Application and validation of AI-driven methods to explore patient experiences of pre-cervical cancer
European Journal of Obstetrics & Gynecology and Reproductive Biology,
Christopher Y K Williams [last], and 1 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence, Cancer, Cervical Cancer, Women's Health, Clinical Research
Knowledge graph representation of the mappings between seizure semiology and epileptogenic zones
Scientific Reports,
Danilo Bernardo, and 14 more from outside UCSF
Altmetric score: 3Related to: Networking and Information Technology R&D (NITRD), Neurodegenerative, Epilepsy, Brain Disorders, Neurosciences
Generative Artificial Intelligence Successfully Automates Data Extraction From Unstructured Magnetic Resonance Imaging Reports: Feasibility in Prostate Cancer Care
JCO Clinical Cancer Informatics,
Anobel Y. Odisho, Andrew W. Liu, William A. Pace, Marvin N. Carlisle, Robert Krumm, Janet E. Cowan, Peter R. Carroll, Matthew R. Cooperberg
Altmetric score: 3Related to: Cancer, Machine Learning and Artificial Intelligence, Aging, Biomedical Imaging, Prostate Cancer, Bioengineering, Urologic Diseases
Can large language models extract operative standards from narrative operative reports in rectal cancer?
Surgery,
Karen Trang [first], Beiqun Zhao, Colleen P Flanagan, Logan Pierce, Elizabeth Wick [last], and 3 more from outside UCSF
Related to: Cancer, Rare Diseases, Digestive Diseases, Colo-Rectal Cancer
The Utility of Artificial Intelligence Platforms for Post‐Operative Mohs Micrographic Surgery Questions: A Blinded Expert Panel Evaluation
International Journal of Dermatology,
Siegrid S. Yu, and 9 more from outside UCSF
Altmetric score: 11Related to: Networking and Information Technology R&D (NITRD), Patient Safety, Machine Learning and Artificial Intelligence, Bioengineering
The Application of Agentic Artificial Intelligence in Orthopaedics
Journal of Bone and Joint Surgery-American Volume,
Stefano A. Bini [last], and 1 more from outside UCSF
Related to: Networking and Information Technology R&D (NITRD), Data Science, Machine Learning and Artificial Intelligence, Bioengineering
Are ChatGPT Answers to Patient Questions Regarding Fecal Incontinence Accurate, Complete, and Consistent With the American Society of Colorectal Surgeons Clinical Practice Guidelines?
Diseases of the Colon & Rectum,
Karen Trang, Elizabeth C Wick, and 10 more from outside UCSF
Related to: Clinical Trials and Supportive Activities, Clinical Research, Colo-Rectal Cancer, Health Disparities and Racial or Ethnic Minority Health Research, Digestive Diseases, Health Disparities, Cancer
Evaluating AI-based comprehensive clinical decision support for sepsis and ARDS: protocol for a Clinician Turing Test
BMJ Open,
Romain Pirracchio, and 12 more from outside UCSF
Altmetric score: 2Related to: Sepsis, Acute Respiratory Distress Syndrome, Clinical Trials and Supportive Activities, Networking and Information Technology R&D (NITRD), Clinical Research, Machine Learning and Artificial Intelligence, Infectious Diseases, Hematology, Rare Diseases, Lung, Patient Safety
Retrospective validation study of a large language model approach to screening for intraabdominal surgical site infections for quality and safety reporting.
BMJ Quality & Safety,
Logan Pierce, Christy Pak, Kim Stanley, Lusha Wang, Caroline Erickson, Deborah S Yokoe, Elizabeth Wick
Related to: Patient Safety
Evaluating AI-based comprehensive clinical decision support for sepsis and ARDS: protocol for a Clinician Turing Test
BMJ Open,
Romain Pirracchio, and 12 more from outside UCSF
Altmetric score: 2Related to: Acute Respiratory Distress Syndrome, Hematology, Patient Safety, Machine Learning and Artificial Intelligence, Clinical Trials and Supportive Activities, Clinical Research, Rare Diseases, Lung, Infectious Diseases, Sepsis, Networking and Information Technology R&D (NITRD)
Integrating Artificial Intelligence Into Medical Student Coaching
The Clinical Teacher,
Andrea Marmor, and 2 more from outside UCSF
Comparing computable structured phenotype- versus large language model-identification of opioid use disorder using electronic health record data
medRxiv,
Melanie Molina [first], Cynthia Fenton, Kathy T. LeSaint, Michael A. Kohn, Aaron E. Kornblith [last], and 1 more from outside UCSF
Altmetric score: 1Related to: Patient Safety, Emergency Care, Opioid Misuse and Addiction, Clinical Research, Brain Disorders, Drug Abuse (NIDA only), Opioids, Substance Misuse
Integrating a host biomarker with a large language model for diagnosis of lower respiratory tract infection
Nature Communications,
Hoang Van Phan, Natasha Spottiswoode, Emily C. Lydon, Victoria T. Chu, Adolfo Cuesta, Alexander D. Kazberouk, Natalie L. Richmond, Padmini Deosthale, Carolyn S. Calfee, Charles R. Langelier
Altmetric score: 65Related to: Rare Diseases, Lung, Infectious Diseases, Clinical Research
Integrating a host biomarker with a large language model for diagnosis of lower respiratory tract infection
Nature Communications,
Hoang Van Phan, Natasha Spottiswoode, Emily C. Lydon, Victoria T. Chu, Adolfo Cuesta, Alexander D. Kazberouk, Natalie L. Richmond, Padmini Deosthale, Carolyn S. Calfee, Charles R. Langelier
Altmetric score: 65Related to: Infectious Diseases, Clinical Research, Lung, Rare Diseases
Machine learning-based mortality prediction in critically ill patients with hypertension: comparative analysis, fairness, and interpretability
Frontiers in Artificial Intelligence,
Sirui Ding, and 3 more from outside UCSF
Altmetric score: 1
Cited 4 timesRelated to: Bioengineering, Brain Disorders, Machine Learning and Artificial Intelligence, Hypertension, Patient Safety, Data Science, Networking and Information Technology R&D (NITRD), Cardiovascular
Evaluating the reliability of large language models in answering FAQs for cataract surgery
Digital Health,
Hassan Asadigandomani, and 4 more from outside UCSF
Related to: Clinical Research, Patient Safety
Evaluating the reliability of large language models in answering FAQs for cataract surgery
Digital Health,
Hassan Asadigandomani, and 4 more from outside UCSF
Related to: Patient Safety, Clinical Research