UCSF AI Publications
Ontology accelerates few-shot learning capability of large language model: A study in extraction of drug efficacy in a rare pediatric epilepsy
International Journal of Medical Informatics,
Joseph E Sullivan, and 18 more from outside UCSF
Related to: Pediatric, Down Syndrome, Neurosciences, Orphan Drug, Epilepsy, Brain Disorders, Intellectual and Developmental Disabilities (IDD), Neurodegenerative, Rare Diseases
Understanding contraceptive switching rationales from real world clinical notes using large language models
npj Digital Medicine,
Brenda Y. Miao [first], Christopher Y. K. Williams, Ebenezer Chinedu-Eneh, Travis Zack, Atul J. Butte, Irene Y. Chen [last], and 1 more from outside UCSF
Altmetric score:
Cited 1 timesRelated to: Patient Safety, Clinical Research, Prevention
Understanding contraceptive switching rationales from real world clinical notes using large language models
npj Digital Medicine,
Brenda Y. Miao [first], Christopher Y. K. Williams, Ebenezer Chinedu-Eneh, Travis Zack, Atul J. Butte, Irene Y. Chen [last], and 1 more from outside UCSF
Cited 1 timesRelated to: Prevention, Patient Safety, Clinical Research
Ontology accelerates few-shot learning capability of large language model: A study in extraction of drug efficacy in a rare pediatric epilepsy
International Journal of Medical Informatics,
Joseph E Sullivan, and 18 more from outside UCSF
Related to: Epilepsy, Down Syndrome, Neurodegenerative, Neurosciences, Brain Disorders, Intellectual and Developmental Disabilities (IDD), Rare Diseases, Pediatric, Orphan Drug
Investigating CAR-T Treatment Access for Multiple Myeloma Patients Using Real-World Evidence
medRxiv,
Jaysón Davidson, Anupama Kumar, Ayan Patel, Irene Y. Chen, Atul J. Butte, Travis Zack
Altmetric score: 1Related to: Hematology, Clinical Research, Minority Health, Cancer, Health Disparities, Rare Diseases
Towards multimodal foundation models in molecular cell biology
Nature,
Hani Goodarzi, and 8 more from outside UCSF
Altmetric score: 144
Cited 5 timesRelated to: Bioengineering, Biotechnology, Genetics, Human Genome, Networking and Information Technology R&D (NITRD)
Comparing ChatGPT3.5 and Bard recommendations for colonoscopy intervals: Bridging the gap in healthcare settings
Endoscopy International Open,
James Buxbaum, and 7 more from outside UCSF
Cited 1 timesRelated to: Health Services, Prevention, Clinical Research, Cancer, Digestive Diseases, Aging, Colo-Rectal Cancer
Information Extraction from Lumbar Spine MRI Radiology Reports Using GPT4: Accuracy and Benchmarking Against Research-Grade Comprehensive Scoring
Diagnostics,
Katharina Ziegeler, Virginie Kreutzinger, Michelle W. Tong, Cynthia T. Chin, Emma Bahroos, Po-Hung Wu, Noah Bonnheim, Aaron J. Fields, Jeffrey C. Lotz, Thomas M. Link, Sharmila Majumdar
Related to: Back Pain, Neurosciences, Pain Research, Bioengineering, Biomedical Imaging
Multimodal cell maps as a foundation for structural and functional genomics
Nature,
Abantika Pal, Neelesh Soni, Andrew P. Latham, Aji Palar, Ernst Pulido, Ignacia Echeverria, Andrej Sali, and 27 more from outside UCSF
Altmetric score: 246
Cited 6 timesRelated to: Cancer
A proof-of-concept study for patient use of open notes with large language models
JAMIA Open,
Jennifer L Clarke, and 7 more from outside UCSF
Altmetric score: 8
Cited 1 timesMultimodal cell maps as a foundation for structural and functional genomics
Nature,
Abantika Pal, Neelesh Soni, Andrew P. Latham, Aji Palar, Ernst Pulido, Ignacia Echeverria, Andrej Sali, and 27 more from outside UCSF
Altmetric score: 242
Cited 7 timesRelated to: Cancer
Gender Disparities in Artificial Intelligence–Generated Images of Hospital Leadership in the United States
Mayo Clinic Proceedings Digital Health,
Odmara L. Barreto Chang, and 9 more from outside UCSF
Cited 1 timesRelated to: Bioengineering, Machine Learning and Artificial Intelligence
A proof-of-concept study for patient use of open notes with large language models
JAMIA Open,
Jennifer L Clarke, and 7 more from outside UCSF
Altmetric score:A Narrative Review on the Application of Large Language Models to Support Cancer Care and Research
Yearbook of Medical Informatics,
Ryzen Benson, Marianna Elia, Benjamin Hyams, Ji Hyun Chang, Julian C. Hong
Altmetric score: 5
Cited 1 timesRelated to: Cancer
Evaluating the effectiveness of biomedical fine-tuning for large language models on clinical tasks
Journal of the American Medical Informatics Association,
Madhumita Sushil, and 9 more from outside UCSF
Altmetric score: 3
Cited 3 timesA clinically accessible small multimodal radiology model and evaluation metric for chest X-ray findings
Nature Communications,
Matthew P. Lungren, and 26 more from outside UCSF
Altmetric score: 5
Cited 2 timesRelated to: Biomedical Imaging
Can we rely on artificial intelligence to guide antimicrobial therapy? A systematic literature review
Antimicrobial Stewardship & Healthcare Epidemiology,
Pedro S. Marra, and 19 more from outside UCSF
Altmetric score: 13Related to: Biodefense, Networking and Information Technology R&D (NITRD), Bioengineering, Antimicrobial Resistance, Infectious Diseases, Patient Safety, Emerging Infectious Diseases, Machine Learning and Artificial Intelligence
Artificial intelligence: international perspectives on critical issues
OTA International The Open Access Journal of Orthopaedic Trauma,
Meir T. Marmor [first], Justin Krogue, and 4 more from outside UCSF
Real-World Type 2 Diabetes Second-Line Treatment Allocation Among Patients
medRxiv,
Jaysón Davidson, Rohit Vashisht, Kendra Radtke, Ayan Patel, Suneil K. Koliwad, Atul J. Butte
Altmetric score: 1Related to: Diabetes, Behavioral and Social Science, Health Disparities, Clinical Research
Changes in fatigue after first-ever ischemic stroke and their associations with changes in physical fitness, body composition, and physical activity
Journal of Stroke and Cerebrovascular Diseases,
Caryl L Gay, and 6 more from outside UCSF
Altmetric score:Related to: Cardiovascular, Rehabilitation, Brain Disorders, Cerebrovascular, Aging, Physical Activity, Prevention, Stroke
Dietary Sugar and Atopic Dermatitis in a Longitudinal Birth Cohort
JID Innovations,
Judy Shan [first], Morgan Ye, Sheng-Pei Wang, Hannah Kang, Ahnna Lee, Erin L. Van Blarigan, Katrina Abuabara [last], and 1 more from outside UCSF
Related to: Nutrition, Clinical Research, Eczema / Atopic Dermatitis, Pediatric
A scoping review on generative AI and large language models in mitigating medication related harm
npj Digital Medicine,
Jasmine Chiat Ling Ong [first], Rosa Rodriguez-Monguio, and 9 more from outside UCSF
Altmetric score: 12Related to: Machine Learning and Artificial Intelligence, Patient Safety
23 Generative artificial intelligence for automated unstructured MRI data extraction in prostate cancer care
Journal of Clinical and Translational Science,
William Pace, Andrew Liu, Marvin Carlisle, Robert Krumm, Janet Cowan, Peter Carroll, Matthew Cooperberg, Anobel Odisho
Related to: Urologic Diseases, Biomedical Imaging, Cancer, Patient Safety, Networking and Information Technology R&D (NITRD), Aging, Prostate Cancer
Interactive Panel Summaries of the 2024 Voice AI Symposium
Frontiers in Digital Health,
Anita Ho, and 81 more from outside UCSF
Altmetric score: 1Exploring Vacuum Erection Device User Feedback: A GPT-4 Thematic Analysis
Urology,
Hiren V Patel [first], Behzad Abbasi, Kevin D Li, Marvin Carlisle, William A Pace, Benjamin N Breyer [last], and 1 more from outside UCSF
Protocol for assessing distances in pathway space for classifier feature sets from machine learning methods
STAR Protocols,
Christina Yau, The Cancer Genome Atlas Analysis Network, and 78 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Biotechnology, Genetics
Biomedical data and AI
Science China Life Sciences,
Hao Li, and 29 more from outside UCSF
Large language model agents can use tools to perform clinical calculations
npj Digital Medicine,
Simon N. Chu, and 3 more from outside UCSF
Altmetric score: 14
Cited 2 timesRelated to: Clinical Research
Enhancing Large Language Models with Retrieval-Augmented Generation: A Radiology-Specific Approach.
Radiology Artificial Intelligence,
Andreas M Rauschecker [last], and 1 more from outside UCSF
Altmetric score: 32
Cited 2 timesIs ‘data science’ science?
Advances in Health Sciences Education,
Patricia O’Sullivan [last], and 1 more from outside UCSF
Related to: Data Science
Non-Face-to-Face Services in Neurologic Care
Seminars in Neurology,
Carrie K. Grouse
Related to: Patient Safety
irAE-GPT: Leveraging large language models to identify immune-related adverse events in electronic health records and clinical trial datasets
medRxiv,
Michelle Wang, Sam Brondfield, Jordyn Silverstein, Kimberly de Dios, Zoe Quandt [last], and 15 more from outside UCSF
Altmetric score: 1Related to: Networking and Information Technology R&D (NITRD), Patient Safety, Cancer, Minority Health, Clinical Research, Health Disparities, Immunotherapy
Implementing Social Determinants of Health Screening in US Emergency Departments
JAMA Network Open,
Melanie Molina, and 7 more from outside UCSF
Altmetric score: 4Related to: Clinical Research, Emergency Care, Health Disparities, Health Services, Behavioral and Social Science, Minority Health
National trends in oncology specialists’ EHR inbox work, 2019–2022
Journal of the National Cancer Institute,
A Jay Holmgren [first], and 3 more from outside UCSF
Altmetric score: 9Related to: Patient Safety, Cancer, Clinical Research, Pediatric
Applications of Artificial Intelligence and Advanced Imaging in Pediatric Diffuse Midline Glioma
Neuro-Oncology,
Atlas Haddadi Avval [first], Suneel Banerjee, Sabine Mueller, Andreas M Rauschecker [last], and 2 more from outside UCSF
Altmetric score: 2Related to: Clinical Research, Rare Diseases, Neurosciences, Brain Cancer, Bioengineering, Machine Learning and Artificial Intelligence, Brain Disorders, Biomedical Imaging, Networking and Information Technology R&D (NITRD), Precision Medicine, Data Science, Cancer
Physician clinical decision modification and bias assessment in a randomized controlled trial of AI assistance
Communications Medicine,
Elaine C. Khoong, and 6 more from outside UCSF
Altmetric score: 3
Cited 1 timesRelated to: Patient Safety, Health Disparities, Minority Health, Clinical Research, Clinical Trials and Supportive Activities, Pain Research
Guiding Principles for Data Sharing and Harmonization: Results of a Systematic Review and Modified Delphi From the Society of Critical Care Medicine Data Science Campaign
Critical Care Medicine,
Heidi J. Engel, and 25 more from outside UCSF
Altmetric score: 13Related to: Data Science
Analyzing patient perspectives with large language models: a cross-sectional study of sentiment and thematic classification on exception from informed consent
Scientific Reports,
Aaron E. Kornblith [first], Chandan Singh, and 13 more from outside UCSF
Altmetric score: 4Artificial intelligence for modelling infectious disease epidemics
Nature,
Serina Y. Chang, and 40 more from outside UCSF
Altmetric score: 316
Cited 8 timesRelated to: Networking and Information Technology R&D (NITRD), Bioengineering, Infectious Diseases, Data Science, Emerging Infectious Diseases, Biodefense, Machine Learning and Artificial Intelligence
Ontology-guided machine learning outperforms zero-shot foundation models for cardiac ultrasound text reports
Scientific Reports,
Suganya Subramaniam [first], Sara Rizvi, Rima Arnaout [last], and 9 more from outside UCSF
Altmetric score: 1Related to: Machine Learning and Artificial Intelligence, Cardiovascular, Networking and Information Technology R&D (NITRD), Biomedical Imaging
AI in neurocritical care: what to expect
Intensive Care Medicine,
J. Claude Hemphill [first], and 1 more from outside UCSF
Altmetric score: 3
Cited 1 timesA comparison of large language model-generated and published perioperative neurocognitive disorder recommendations: a cross-sectional web-based analysis
British Journal of Anaesthesia,
Odmara L Barreto Chang, Mervyn Maze, and 9 more from outside UCSF
Altmetric score: 4Related to: Networking and Information Technology R&D (NITRD), Neurosciences
Challenges with reinforcement learning model transportability for sepsis treatment in emergency care
npj Digital Medicine,
Romain Pirracchio, and 6 more from outside UCSF
Altmetric score: 1Related to: Emergency Care, Sepsis, Clinical Research, Machine Learning and Artificial Intelligence, Hematology, Infectious Diseases, Health Services
Using the WHO building blocks to examine cross-border public health surveillance in MENA
International Journal for Equity in Health,
Laura Buback [first], Shayanne Martin, Esbeydy Pardo, Farah Massoud, Jesus Formigo, Atousa Bonyani, Susie Welty, and 4 more from outside UCSF
Cited 1 timesReal world perspectives on endometriosis disease phenotyping through surgery, omics, health data, and artificial intelligence
npj Women's Health,
Camran R. Nezhat [first], Tomiko T. Oskotsky, Joshua F. Robinson, Susan J. Fisher, Binya Liu, Juan C. Irwin, Marina Sirota, Linda C. Giudice [last], and 3 more from outside UCSF
Altmetric score: 18Related to: Genetics, Precision Medicine, Endometriosis, Women's Health, Bioengineering, Machine Learning and Artificial Intelligence, Contraception/Reproduction, Clinical Research
Reply: “Continuing the Chat: How Can We Improve the Performance of an Artificial Intelligence Chatbot in Answering Clinical Infectious Diseases Pharmacotherapy Questions?”
Open Forum Infectious Diseases,
Conan MacDougall, and 5 more from outside UCSF
Related to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering, Clinical Research
AI In Action: Redefining Drug Discovery and Development
Clinical and Translational Science,
Liang Zhao, and 3 more from outside UCSF
Altmetric score: 1
Cited 2 timesThe MI-CLAIM-GEN checklist for generative artificial intelligence in health
Nature Medicine,
Brenda Y. Miao [first], Irene Y. Chen, Christopher Y. K. Williams, Jaysón Davidson, Augusto Garcia-Agundez, Shenghuan Sun, Travis Zack, Rima Arnaout, Milena Gianfrancesco, Atul J. Butte, Madhumita Sushil [last], and 7 more from outside UCSF
Altmetric score: 13Related to: Networking and Information Technology R&D (NITRD), Machine Learning and Artificial Intelligence
FUTURE-AI: international consensus guideline for trustworthy and deployable artificial intelligence in healthcare
The BMJ,
John Mongan, and 120 more from outside UCSF
Altmetric score: 130
Cited 7 timesRelated to: Machine Learning and Artificial Intelligence, Networking and Information Technology R&D (NITRD), Bioengineering
FUTURE-AI: international consensus guideline for trustworthy and deployable artificial intelligence in healthcare
The BMJ,
John Mongan, and 120 more from outside UCSF
Altmetric score: 130
Cited 13 timesRelated to: Networking and Information Technology R&D (NITRD), Bioengineering, Machine Learning and Artificial Intelligence